Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq6969 201 1e-46 seq6968 201 1e-46 seq6967 201 1e-46 >seq6969 Length=25347 Score = 201 bits (222), Expect = 1e-46 Identities = 501/757 (66%), Gaps = 8/757 (1%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||||||||| |||||||| || || ||| ||| |||||| ||||| ||||| Sbjct 10229 GCCACCCCGACCCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCGTGCTTCCTC 10288 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | || |||| |||| ||| ||| || | ||||| || ||||| || || | Sbjct 10289 GTCGCGTCGAAGGACGACAGCATTGACGGGATCTACGACACGCTGAAGGAGTGCGCCGTC 10348 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || ||||| | || ||| || | || || || | Sbjct 10349 ATCAGCAAGGCGGCCGGCGGCATCGGCCTGCACGTGCACAACATCCGCTCCGCCGGCAGC 10408 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| || || || ||||| || |||||||| || || ||||| || || |||||| Sbjct 10409 TACATCGCTGGCACGAACGGCACGTCGAACGGCCTGGTGCCGATGCTGCGCGTGTTCAAC 10468 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| |||| ||||||||||||||||| || || | | | ||||| | ||||| | || Sbjct 10469 AACACGGCCCGCTACGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATTTAC 10528 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG---AACCACGGC 94248 |||||||| |||||||| ||| | | ||| | |||| ||| ||| |||| Sbjct 10529 CTCGAGCCGTGGCACGCCGACATCTTCGGCTTCCT---GCTGCTGAAGCGCAACACCGGC 10585 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | || | |||||||||||||| || ||| | || ||||| || ||| Sbjct 10586 AAGGACGACCAGCGTGCGCGCGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATG 10645 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAA-TGAATGTCCCGGACT 94367 || ||||| ||| | |||| | | | | ||||| | || || || || Sbjct 10646 AAGCGCGTGAAGAGTGAGGGGAAGTGGACGC-TGATGGACCCAAGTACGTGCCCGGGTCT 10704 Query 94368 GTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 ||| | || | || || | |||| | || ||||| || ||||| Sbjct 10705 CAGTGACTGCTACGGCGAGGAGTTCGAGCGCCTGTACGAGCGCTACGAGGCGGAGGGCCG 10764 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | | || || | || | || ||||| | ||| | || ||| | || Sbjct 10765 CGGAGTGCAGACGATCCAGGCACAGGAGGTGTGGTTTGCGATTCTCGAGTCGCAGATCGA 10824 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || || | |||| | | ||||||| | |||| |||||| |||||| || | Sbjct 10825 GACCGGCGTCCCGTTCATCCTCTACAAGGACGCGTGCAACAGCAAGTCGAACCAGAAGAA 10884 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 |||||| |||||| ||||||| || |||||||||||||| ||||| || || ||||| Sbjct 10885 CCTCGGCACCATCAAGTGCTCGAACCTCTGCACCGAGATTGTGGAGTACACGTCGCCGGA 10944 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTG 94644 |||| || ||||| ||||| | ||||||| |||| Sbjct 10945 GGAGACCGCGGTGTGCAACCTCGCCTCCATCGCCCTG 10981 Score = 116 bits (128), Expect = 4e-21 Identities = 201/286 (70%), Gaps = 17/286 (6%) Strand=Plus/Plus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 ||||||| | || |||||||| ||||| || |||| ||||| ||||||||||||| Sbjct 11429 CTGCTTGCG---CCGATGCCCACCGCCTCGACCTCGCAAATCCTCGGCAACAACGAGTGC 11485 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214 ||||| || |||||||| ||| | || | || ||||| ||| || ||||| || Sbjct 11486 TTCGAGCCTTTCACCTCGAACATCTATGTTCGTCGCGTGCTGAGCGGCGAGTTCCCGGTG 11545 Query 95215 ATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGT---C 95271 | |||||| ||||| | |||||| | | || ||||| ||| | | | | Sbjct 11546 GTGAACAAGTACCTCGTGATGGACCTCATTAAGCGCGGCCTGTGGAATGAGACGATGCGC 11605 Query 95272 AA-GA-ACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC--CCGCAAATACCGGA 95327 || || | || || ||| |||||||||||| | || |||| | || || ||||| Sbjct 11606 AACGAGATCATCTCCTA-----CAACGGCTCCGTGCTGACCATCGACAGC--ATCCCGGA 11658 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 ||| | |||| ||| ||| || ||||||||||||||||||||| Sbjct 11659 CGACCTGAAGGAGCTGTACCGCACGGTGTGGGAGATCCCGCAGCGC 11704 >seq6968 Length=12362 Score = 201 bits (222), Expect = 1e-46 Identities = 501/757 (66%), Gaps = 8/757 (1%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||||||||| |||||||| || || ||| ||| |||||| ||||| ||||| Sbjct 10229 GCCACCCCGACCCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCGTGCTTCCTC 10288 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | || |||| |||| ||| ||| || | ||||| || ||||| || || | Sbjct 10289 GTCGCGTCGAAGGACGACAGCATTGACGGGATCTACGACACGCTGAAGGAGTGCGCCGTC 10348 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || ||||| | || ||| || | || || || | Sbjct 10349 ATCAGCAAGGCGGCCGGCGGCATCGGCCTGCACGTGCACAACATCCGCTCCGCCGGCAGC 10408 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| || || || ||||| || |||||||| || || ||||| || || |||||| Sbjct 10409 TACATCGCTGGCACGAACGGCACGTCGAACGGCCTGGTGCCGATGCTGCGCGTGTTCAAC 10468 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| |||| ||||||||||||||||| || || | | | ||||| | ||||| | || Sbjct 10469 AACACGGCCCGCTACGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATTTAC 10528 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG---AACCACGGC 94248 |||||||| |||||||| ||| | | ||| | |||| ||| ||| |||| Sbjct 10529 CTCGAGCCGTGGCACGCCGACATCTTCGGCTTCCT---GCTGCTGAAGCGCAACACCGGC 10585 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | || | |||||||||||||| || ||| | || ||||| || ||| Sbjct 10586 AAGGACGACCAGCGTGCGCGCGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATG 10645 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAA-TGAATGTCCCGGACT 94367 || ||||| ||| | |||| | | | | ||||| | || || || || Sbjct 10646 AAGCGCGTGAAGAGTGAGGGGAAGTGGACGC-TGATGGACCCAAGTACGTGCCCGGGTCT 10704 Query 94368 GTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 ||| | || | || || | |||| | || ||||| || ||||| Sbjct 10705 CAGTGACTGCTACGGCGAGGAGTTCGAGCGCCTGTACGAGCGCTACGAGGCGGAGGGCCG 10764 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | | || || | || | || ||||| | ||| | || ||| | || Sbjct 10765 CGGAGTGCAGACGATCCAGGCACAGGAGGTGTGGTTTGCGATTCTCGAGTCGCAGATCGA 10824 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || || | |||| | | ||||||| | |||| |||||| |||||| || | Sbjct 10825 GACCGGCGTCCCGTTCATCCTCTACAAGGACGCGTGCAACAGCAAGTCGAACCAGAAGAA 10884 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 |||||| |||||| ||||||| || |||||||||||||| ||||| || || ||||| Sbjct 10885 CCTCGGCACCATCAAGTGCTCGAACCTCTGCACCGAGATTGTGGAGTACACGTCGCCGGA 10944 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTG 94644 |||| || ||||| ||||| | ||||||| |||| Sbjct 10945 GGAGACCGCGGTGTGCAACCTCGCCTCCATCGCCCTG 10981 Score = 116 bits (128), Expect = 4e-21 Identities = 201/286 (70%), Gaps = 17/286 (6%) Strand=Plus/Plus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 ||||||| | || |||||||| ||||| || |||| ||||| ||||||||||||| Sbjct 11429 CTGCTTGCG---CCGATGCCCACCGCCTCGACCTCGCAAATCCTCGGCAACAACGAGTGC 11485 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214 ||||| || |||||||| ||| | || | || ||||| ||| || ||||| || Sbjct 11486 TTCGAGCCTTTCACCTCGAACATCTATGTTCGTCGCGTGCTGAGCGGCGAGTTCCCGGTG 11545 Query 95215 ATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGT---C 95271 | |||||| ||||| | |||||| | | || ||||| ||| | | | | Sbjct 11546 GTGAACAAGTACCTCGTGATGGACCTCATTAAGCGCGGCCTGTGGAATGAGACGATGCGC 11605 Query 95272 AA-GA-ACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC--CCGCAAATACCGGA 95327 || || | || || ||| |||||||||||| | || |||| | || || ||||| Sbjct 11606 AACGAGATCATCTCCTA-----CAACGGCTCCGTGCTGACCATCGACAGC--ATCCCGGA 11658 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 ||| | |||| ||| ||| || ||||||||||||||||||||| Sbjct 11659 CGACCTGAAGGAGCTGTACCGCACGGTGTGGGAGATCCCGCAGCGC 11704 >seq6967 Length=22635 Score = 201 bits (222), Expect = 1e-46 Identities = 501/757 (66%), Gaps = 8/757 (1%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||||||||| |||||||| || || ||| ||| |||||| ||||| ||||| Sbjct 1970 GCCACCCCGACCCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCGTGCTTCCTC 1911 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | || |||| |||| ||| ||| || | ||||| || ||||| || || | Sbjct 1910 GTCGCGTCGAAGGACGACAGCATTGACGGGATCTACGACACGCTGAAGGAGTGCGCCGTC 1851 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || ||||| | || ||| || | || || || | Sbjct 1850 ATCAGCAAGGCGGCCGGCGGCATCGGCCTGCACGTGCACAACATCCGCTCCGCCGGCAGC 1791 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| || || || ||||| || |||||||| || || ||||| || || |||||| Sbjct 1790 TACATCGCTGGCACGAACGGCACGTCGAACGGCCTGGTGCCGATGCTGCGCGTGTTCAAC 1731 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| |||| ||||||||||||||||| || || | | | ||||| | ||||| | || Sbjct 1730 AACACGGCCCGCTACGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATTTAC 1671 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG---AACCACGGC 94248 |||||||| |||||||| ||| | | ||| | |||| ||| ||| |||| Sbjct 1670 CTCGAGCCGTGGCACGCCGACATCTTCGGCTTCCT---GCTGCTGAAGCGCAACACCGGC 1614 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | || | |||||||||||||| || ||| | || ||||| || ||| Sbjct 1613 AAGGACGACCAGCGTGCGCGCGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATG 1554 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAA-TGAATGTCCCGGACT 94367 || ||||| ||| | |||| | | | | ||||| | || || || || Sbjct 1553 AAGCGCGTGAAGAGTGAGGGGAAGTGGACGC-TGATGGACCCAAGTACGTGCCCGGGTCT 1495 Query 94368 GTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 ||| | || | || || | |||| | || ||||| || ||||| Sbjct 1494 CAGTGACTGCTACGGCGAGGAGTTCGAGCGCCTGTACGAGCGCTACGAGGCGGAGGGCCG 1435 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | | || || | || | || ||||| | ||| | || ||| | || Sbjct 1434 CGGAGTGCAGACGATCCAGGCACAGGAGGTGTGGTTTGCGATTCTCGAGTCGCAGATCGA 1375 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || || | |||| | | ||||||| | |||| |||||| |||||| || | Sbjct 1374 GACCGGCGTCCCGTTCATCCTCTACAAGGACGCGTGCAACAGCAAGTCGAACCAGAAGAA 1315 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 |||||| |||||| ||||||| || |||||||||||||| ||||| || || ||||| Sbjct 1314 CCTCGGCACCATCAAGTGCTCGAACCTCTGCACCGAGATTGTGGAGTACACGTCGCCGGA 1255 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTG 94644 |||| || ||||| ||||| | ||||||| |||| Sbjct 1254 GGAGACCGCGGTGTGCAACCTCGCCTCCATCGCCCTG 1218 Score = 116 bits (128), Expect = 4e-21 Identities = 201/286 (70%), Gaps = 17/286 (6%) Strand=Plus/Minus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 ||||||| | || |||||||| ||||| || |||| ||||| ||||||||||||| Sbjct 770 CTGCTTGCG---CCGATGCCCACCGCCTCGACCTCGCAAATCCTCGGCAACAACGAGTGC 714 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214 ||||| || |||||||| ||| | || | || ||||| ||| || ||||| || Sbjct 713 TTCGAGCCTTTCACCTCGAACATCTATGTTCGTCGCGTGCTGAGCGGCGAGTTCCCGGTG 654 Query 95215 ATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGT---C 95271 | |||||| ||||| | |||||| | | || ||||| ||| | | | | Sbjct 653 GTGAACAAGTACCTCGTGATGGACCTCATTAAGCGCGGCCTGTGGAATGAGACGATGCGC 594 Query 95272 AA-GA-ACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC--CCGCAAATACCGGA 95327 || || | || || ||| |||||||||||| | || |||| | || || ||||| Sbjct 593 AACGAGATCATCTCCTA-----CAACGGCTCCGTGCTGACCATCGACAGC--ATCCCGGA 541 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 ||| | |||| ||| ||| || ||||||||||||||||||||| Sbjct 540 CGACCTGAAGGAGCTGTACCGCACGGTGTGGGAGATCCCGCAGCGC 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494660994741640