Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq7593 96.9 3e-15 seq6102 96.9 3e-15 >seq7593 Length=7721 Score = 96.9 bits (106), Expect = 3e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 52113 CAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCAC 52172 |||||||||||||||||| | ||||| |||||||||||||||||||||||||| ||| Sbjct 3326 CAGGAGGACATGCCCTTCAATCGTGACGGCGTGGTGCCCGACCTCATCATCAACCCGCAC 3267 Query 52173 GCCTTTCCATCCAGGATGACCGT 52195 ||| |||| ||| | ||||| || Sbjct 3266 GCCATTCCTTCCCGTATGACGGT 3244 >seq6102 Length=7716 Score = 96.9 bits (106), Expect = 3e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 52113 CAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCAC 52172 |||||||||||||||||| | ||||| |||||||||||||||||||||||||| ||| Sbjct 4391 CAGGAGGACATGCCCTTCAATCGTGACGGCGTGGTGCCCGACCTCATCATCAACCCGCAC 4450 Query 52173 GCCTTTCCATCCAGGATGACCGT 52195 ||| |||| ||| | ||||| || Sbjct 4451 GCCATTCCTTCCCGTATGACGGT 4473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408567505908407