Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11]
10,059 sequences; 49,951,730 total letters
Query= NC_019407.1
Length=218929
Score E
Sequences producing significant alignments: (Bits) Value
seq5296 109 8e-19
>seq5296
Length=18544
Score = 109 bits (120), Expect = 8e-19
Identities = 123/166 (74%), Gaps = 9/166 (5%)
Strand=Plus/Minus
Query 136019 CTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCAC 136078
||||||||||| ||||||| ||| || || ||||||||||| ||||| ||||||||
Sbjct 14848 CTCGATGAAGACGGAGCCGATGCGGTTACCCACACCGCGCGAGCCGGAGTGCAGCATCAC 14789
Query 136079 CCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCC 136129
||| ||| |||| | ||||||||||||| ||||||||||||||||||
Sbjct 14788 CCACACGTGCGGCTGCGGCTGTTGATCGTCGAGGCAGAGCTCGATGAAGTGGTTGCCTGT 14729
Query 136130 GCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAGCGCC 136175
||| || ||||| || ||| || | ||| | |||| |||| ||
Sbjct 14728 GCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCAGCACC 14683
Score = 102 bits (112), Expect = 1e-16
Identities = 197/280 (70%), Gaps = 12/280 (4%)
Strand=Plus/Minus
Query 135471 ATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCCTTA 135530
|| || ||||||||||||||||| || ||| | || || | ||||| ||||||
Sbjct 15450 ATCACTGCGTCGATGTCCTTGTACGCGGCCGGCGTCTCATCCAGCACGCTGCTGTCCTTG 15391
Query 135531 CGGCACTCCACGCCCTCGGTGGCCTTGATC-TGGTCCTCCAGGGTGAAG-GTCGCCTTGG 135588
|| ||||| | || ||||||| | || || || | ||||||||| | || | ||
Sbjct 15390 CGACACTCGATCCCAGTGGTGGCCA-GCTCGTGATCGGCGAGGGTGAAGCGGCGGCGTG- 15333
Query 135589 CCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCG 135645
||| ||| |||| | || ||| ||||| ||||||||||| |||||| | |||
Sbjct 15332 CCTC--TCCACGACTGTAGCG-CCGTCCCGCCCCGTGCGAGCAGGAGCAGTAGCTCGCCG 15276
Query 135646 CATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGA 135705
| | || || ||||| ||||||||| ||||||||||||||| || |||| |||
Sbjct 15275 CGCTCCCTTTCCCGCGAACGATGTAGCTACGGGCCCCCATCGAGCCAGGAATGACGGCGA 15216
Query 135706 ACTGGTCCT-TCTGCGCCGACACCGCGCCCTTGCGGGTCA 135744
|| | | | |||| ||||| ||||| ||||| ||||
Sbjct 15215 GCTCGCCTTGTCTG-GCCGAGGTGGCGCCTTTGCGTGTCA 15177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 700356727821960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |