Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq5296 109 8e-19 >seq5296 Length=18544 Score = 109 bits (120), Expect = 8e-19 Identities = 123/166 (74%), Gaps = 9/166 (5%) Strand=Plus/Minus Query 136019 CTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCAC 136078 ||||||||||| ||||||| ||| || || ||||||||||| ||||| |||||||| Sbjct 14848 CTCGATGAAGACGGAGCCGATGCGGTTACCCACACCGCGCGAGCCGGAGTGCAGCATCAC 14789 Query 136079 CCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCC 136129 ||| ||| |||| | ||||||||||||| |||||||||||||||||| Sbjct 14788 CCACACGTGCGGCTGCGGCTGTTGATCGTCGAGGCAGAGCTCGATGAAGTGGTTGCCTGT 14729 Query 136130 GCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAGCGCC 136175 ||| || ||||| || ||| || | ||| | |||| |||| || Sbjct 14728 GCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCAGCACC 14683 Score = 102 bits (112), Expect = 1e-16 Identities = 197/280 (70%), Gaps = 12/280 (4%) Strand=Plus/Minus Query 135471 ATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCCTTA 135530 || || ||||||||||||||||| || ||| | || || | ||||| |||||| Sbjct 15450 ATCACTGCGTCGATGTCCTTGTACGCGGCCGGCGTCTCATCCAGCACGCTGCTGTCCTTG 15391 Query 135531 CGGCACTCCACGCCCTCGGTGGCCTTGATC-TGGTCCTCCAGGGTGAAG-GTCGCCTTGG 135588 || ||||| | || ||||||| | || || || | ||||||||| | || | || Sbjct 15390 CGACACTCGATCCCAGTGGTGGCCA-GCTCGTGATCGGCGAGGGTGAAGCGGCGGCGTG- 15333 Query 135589 CCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCG 135645 ||| ||| |||| | || ||| ||||| ||||||||||| |||||| | ||| Sbjct 15332 CCTC--TCCACGACTGTAGCG-CCGTCCCGCCCCGTGCGAGCAGGAGCAGTAGCTCGCCG 15276 Query 135646 CATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGA 135705 | | || || ||||| ||||||||| ||||||||||||||| || |||| ||| Sbjct 15275 CGCTCCCTTTCCCGCGAACGATGTAGCTACGGGCCCCCATCGAGCCAGGAATGACGGCGA 15216 Query 135706 ACTGGTCCT-TCTGCGCCGACACCGCGCCCTTGCGGGTCA 135744 || | | | |||| ||||| ||||| ||||| |||| Sbjct 15215 GCTCGCCTTGTCTG-GCCGAGGTGGCGCCTTTGCGTGTCA 15177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700356727821960