Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq5296 120 4e-22 >seq5296 Length=18544 Score = 120 bits (132), Expect = 4e-22 Identities = 494/762 (65%), Gaps = 58/762 (8%) Strand=Plus/Minus Query 139748 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAAGGGCG--GC 139805 ||||| |||||||||||||||||||| || || |||| || |||||||| || Sbjct 15091 CTTCTCCACGTAGTTGTGGTGGCAGTTAACGGCGGCCTTCGTGGTGGTGAAGGGCACCGC 15032 Query 139806 AGGCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTGATCCGC 139865 | | | ||||||| || |||| ||| | || ||||| || ||||| || | Sbjct 15031 AATGC--ATTCGCGCATCGCTGCCAGCACCGCGTCCAGCATCAGCTGCCGGTTCCACCAC 14974 Query 139866 GCGAAGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCCGGCTCGCCTTCC 139925 || || ||| |||| | || || | |||||||| || | |||||| Sbjct 14973 GCAAAACGCTGCGCCCACTCCACCGCGAAAATGTAGTCGTCAAAGTGTTTTGTGCCTTCA 14914 Query 139926 GACAGCCACGCGAGGTCCTTGTCGAGCGGCTTCTGACCGTCCCGACGCAGCATCATC-TC 139984 || ||||||| || |||| | | | ||| | | |||| | | || | Sbjct 14913 CGCAAGTACGCGAGATCGGCGTCGGGTAGGT---GACTCAGCTG-CGCACCGACGTCCTT 14858 Query 139985 CTTGGCCTTCTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTG 140044 ||| || ||||||||||| ||||||| ||| || || ||||||||||| ||||| Sbjct 14857 CTTCGCGAGCTCGATGAAGACGGAGCCGATGCGGTTACCCACACCGCGCGAGCCGGAGTG 14798 Query 140045 GAGCATCACCCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTG 140095 ||||||||||| ||| |||| | ||||||||||||| |||||||||||| Sbjct 14797 CAGCATCACCCACACGTGCGGCTGCGGCTGTTGATCGTCGAGGCAGAGCTCGATGAAGTG 14738 Query 140096 GTTGCCGCCGCCCAGCGTGCCCAGTTGGACGACGCTGTTGGCGTTCTTGAGGGTCTTGTA 140155 |||||| ||| |||||||| || ||| | | ||| | |||| || | || Sbjct 14737 GTTGCCTGTGCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCAGCACCCCATA 14678 Query 140156 CTTGTCGCAGAGCTTCTCGAA-CCGGGCTTCCAGGCCCGAGTCGACCCAC---TTGCGCA 140211 | ||| |||| ||| || || || ||||| | ||| | || |||| Sbjct 14677 GCGGCGGCACAGCTCCTCAAAGTCGTGC-GCCAGG-TGGTCTCGCCAGACACGTTGC--- 14623 Query 140212 TGATCGAGTTCGGGA----TGCCGCTACGCCCGTTCCAGCCGCC-CGACGGAC---CCGG 140263 | |||| ||||| |||| | |||| || || || ||||| | ||| Sbjct 14622 --ACCGAG-GCGGGAGCGTCACCGCGCCACCCG--CCGGCGTCCGCGACGCTCTTGCCGC 14568 Query 140264 C-------CCGCCGTGCGGGACGGCGTGCTCGATCAGCGAG-CGCAGCTTGGCGAGGCTG 140315 | | |||||||| ||| |||| | | || || |||||| || || | Sbjct 14567 CGTGTGTGCGACCGTGCGGCACGCGCAGCTCCA-CCGCCAGCCGCAGCGCCGCCAGCGAG 14509 Query 140316 TCGGGCAGGTC---CGAGGCCTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATG 140372 |||||||| || || ||| |||||| || |||||| ||||||||||| ||||| Sbjct 14508 TCGGGCAGATCTCGCGCGGC---CAGCGACGTCTCCACGGCGATCATGCCGCACCCGATA 14452 Query 140373 TCCACGCCCACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGATCACCGAGC---CCACG 140429 ||||| || || ||| |||||||||||| | |||||| | ||| || ||||| Sbjct 14451 TCCACCCCGACACTCGCAGGGATGATGGCGTGCACGGTCGGCAGCACGAGGCCCACCACG 14392 Query 140430 GTCGAGCCGATGCCCATGTGGACGTCCGGCATCAGGGCCACA 140471 || |||| || || ||| ||||||||||| | ||| ||| Sbjct 14391 GTGCAGCCCATACCTGCGTGCACGTCCGGCATGACGGCGACA 14350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715686000115200