Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq5296 114 2e-20 >seq5296 Length=18544 Score = 114 bits (126), Expect = 2e-20 Identities = 124/166 (75%), Gaps = 9/166 (5%) Strand=Plus/Minus Query 136582 CTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCAC 136641 ||||||||||| | ||||||| ||| || || ||||||||||| ||||| |||||||| Sbjct 14848 CTCGATGAAGACGGAGCCGATGCGGTTACCCACACCGCGCGAGCCGGAGTGCAGCATCAC 14789 Query 136642 CCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCC 136692 ||| ||| |||| | ||||||||||||| |||||||||||||||||| Sbjct 14788 CCACACGTGCGGCTGCGGCTGTTGATCGTCGAGGCAGAGCTCGATGAAGTGGTTGCCTGT 14729 Query 136693 GCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAGCGCC 136738 ||| || ||||| || ||| || | ||| | |||| |||| || Sbjct 14728 GCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCAGCACC 14683 Score = 89.7 bits (98), Expect = 7e-13 Identities = 168/236 (71%), Gaps = 12/236 (5%) Strand=Plus/Minus Query 136078 CACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATC-TGGTCCTCCAGGG 136136 ||||| | ||||||||| ||||| | || ||||||| | || || || | |||| Sbjct 15406 CACGCTGCTGTCCTTGCGACACTCGATCCCAGTGGTGGCCA-GCTCGTGATCGGCGAGGG 15348 Query 136137 TGAAG-GTCGCCTTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTGCGAGCAC 136192 ||||| | || | || ||| ||| |||| | || ||| ||||| ||||||||||| Sbjct 15347 TGAAGCGGCGGCGTG-CCTC--TCCACGACTGTAGCG-CCGTCCCGCCCCGTGCGAGCAG 15292 Query 136193 GAGCAGAACGAGTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAG 136252 |||||| | ||||| | || || ||||| ||||||||| ||||||||||||| Sbjct 15291 GAGCAGTAGCTCGCCGCGCTCCCTTTCCCGCGAACGATGTAGCTACGGGCCCCCATCGAG 15232 Query 136253 CCGGGGATGATCCCGAACTGGTCCT-TCTGCGCCGACACCGCGCCCTTGCGGGTCA 136307 || || |||| ||| || | | | |||| ||||| ||||| ||||| |||| Sbjct 15231 CCAGGAATGACGGCGAGCTCGCCTTGTCTG-GCCGAGGTGGCGCCTTTGCGTGTCA 15177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701275012344640