Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11]
10,059 sequences; 49,951,730 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq6969 109 2e-18
seq6968 109 2e-18
seq6967 109 2e-18
>seq6969
Length=25347
Score = 109 bits (120), Expect = 2e-18
Identities = 129/172 (75%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647
|| || || || || || ||||| ||||||| | || || |||| || ||||||||
Sbjct 10974 ATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 10916
Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707
||| ||||| || | |||||||||||| | ||||||||||| || || ||||| || ||
Sbjct 10915 GCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 10856
Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|||||||| || ||| | ||| || ||||| ||||| | || ||||||
Sbjct 10855 GTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 10804
>seq6968
Length=12362
Score = 109 bits (120), Expect = 2e-18
Identities = 129/172 (75%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647
|| || || || || || ||||| ||||||| | || || |||| || ||||||||
Sbjct 10974 ATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 10916
Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707
||| ||||| || | |||||||||||| | ||||||||||| || || ||||| || ||
Sbjct 10915 GCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 10856
Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|||||||| || ||| | ||| || ||||| ||||| | || ||||||
Sbjct 10855 GTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 10804
>seq6967
Length=22635
Score = 109 bits (120), Expect = 2e-18
Identities = 129/172 (75%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647
|| || || || || || ||||| ||||||| | || || |||| || ||||||||
Sbjct 1225 ATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 1283
Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707
||| ||||| || | |||||||||||| | ||||||||||| || || ||||| || ||
Sbjct 1284 GCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 1343
Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|||||||| || ||| | ||| || ||||| ||||| | || ||||||
Sbjct 1344 GTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 1395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471627910767883
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |