Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6969 109 2e-18 seq6968 109 2e-18 seq6967 109 2e-18 >seq6969 Length=25347 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || ||||| ||||||| | || || |||| || |||||||| Sbjct 10974 ATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 10916 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||| ||||| || | |||||||||||| | ||||||||||| || || ||||| || || Sbjct 10915 GCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 10856 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 |||||||| || ||| | ||| || ||||| ||||| | || |||||| Sbjct 10855 GTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 10804 >seq6968 Length=12362 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || ||||| ||||||| | || || |||| || |||||||| Sbjct 10974 ATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 10916 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||| ||||| || | |||||||||||| | ||||||||||| || || ||||| || || Sbjct 10915 GCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 10856 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 |||||||| || ||| | ||| || ||||| ||||| | || |||||| Sbjct 10855 GTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 10804 >seq6967 Length=22635 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || ||||| ||||||| | || || |||| || |||||||| Sbjct 1225 ATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 1283 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||| ||||| || | |||||||||||| | ||||||||||| || || ||||| || || Sbjct 1284 GCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 1343 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 |||||||| || ||| | ||| || ||||| ||||| | || |||||| Sbjct 1344 GTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATC 1395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471627910767883