Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq5296 114 4e-21 >seq5296 Length=18544 Score = 114 bits (126), Expect = 4e-21 Identities = 216/313 (69%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 37204 GGCGACCTGGGCATCATCCCTGGCTCGATGGGTGC--GAAGTCATTCATCGTTCGCGGCA 37261 ||||| || | | |||| |||||||||||||| || | || | |||||||||||| | Sbjct 15209 GGCGAGCTCGCCGTCATTCCTGGCTCGATGGGGGCCCGTAGCTA--CATCGTTCGCGGGA 15266 Query 37262 AGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGG 37321 | || | | | | |||||| ||| ||||| || || || || || | Sbjct 15267 AAGGGAGCGCGGCGAGCTACTGCTCCTGCTCGCACGGGGCGGGACGGCGCTACAGTCGTG 15326 Query 37322 CCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGT 37381 || ||| ||||| ||||| ||| ||||| ||| |||||||| || ||||||| Sbjct 15327 GAGAGGCACGCCGCCGCTTCACCCTCGCCGATCACGAGCTGGCCACCACTGGGATCGAGT 15386 Query 37382 GCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGG 37441 | ||||| || | ||| | || |||||||| || || |||||||||||||| || | Sbjct 15387 GTCGCAAGGACAGCAGCGTGCTGGATGAGACGCCGGCCGCGTACAAGGACATCGACGCAG 15446 Query 37442 TCATGGCCGCGCAATCCGCCCTGGTGGACATCGT-GCACACGCTGCGCCAAGTCGTTTGC 37500 | || || |||||| | | ||||||| | || ||| | ||||||| || | || Sbjct 15447 TGATTGCTGCGCAACGTGACTTGGTGGAGGTAGTAGCA-GTGTTGCGCCAGATCATGTGT 15505 Query 37501 GTGAAGGGTTGAG 37513 |||||||| |||| Sbjct 15506 GTGAAGGGATGAG 15518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139266562534708