Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq9639 84.2 2e-11 seq9638 84.2 2e-11 >seq9639 Length=11758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/254 (69%), Gaps = 15/254 (6%) Strand=Plus/Plus Query 142562 TCGTCACCGCGTGGAACCC-TGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATG 142620 || |||| ||||||||||| ||| | | | | | ||||| || || || || ||| || Sbjct 8056 TCTTCACGGCGTGGAACCCGTGC-GCACTGCATAAGATGGCCCTCCCCCCTTGCCACCTG 8114 Query 142621 ATGTTCCAATTCCACGTCGACTCGAA---GAAGCGTCTGTCATGCCAGCTGTATCAGCGT 142677 | ||| ||| ||||| || || | |||| |||| ||| |||||||||||| Sbjct 8115 CTCGGCCAGTTCTACGTCAACACGGACACGAAGGAGTTGTCCTGCATGCTGTATCAGCGC 8174 Query 142678 TCGGCAGAC-TGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACA 142736 ||| ||| ||| | ||||| || |||||||||||||| |||||| |||| || || Sbjct 8175 TCGTGTGACATGGGT-CTCGGGGTGCCGTTCAACATTGCGTCGTACTCGCTGCTGAC--- 8230 Query 142737 GCTCATTGCTCGCGAATG----CGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCA 142792 | || ||| |||| || | ||| ||| | || || | || |||||| |||| Sbjct 8231 GATC-TTGATCGCAAAGGCGACCGGGCTGCGTCCGGGGGAGCTGGTGCACACCCTCGGTG 8289 Query 142793 ATTCGCACATCTAC 142806 | ||||| ||||| Sbjct 8290 ACGCGCACGTCTAC 8303 >seq9638 Length=11764 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/254 (69%), Gaps = 15/254 (6%) Strand=Plus/Plus Query 142562 TCGTCACCGCGTGGAACCC-TGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATG 142620 || |||| ||||||||||| ||| | | | | | ||||| || || || || ||| || Sbjct 8062 TCTTCACGGCGTGGAACCCGTGC-GCACTGCATAAGATGGCCCTCCCCCCTTGCCACCTG 8120 Query 142621 ATGTTCCAATTCCACGTCGACTCGAA---GAAGCGTCTGTCATGCCAGCTGTATCAGCGT 142677 | ||| ||| ||||| || || | |||| |||| ||| |||||||||||| Sbjct 8121 CTCGGCCAGTTCTACGTCAACACGGACACGAAGGAGTTGTCCTGCATGCTGTATCAGCGC 8180 Query 142678 TCGGCAGAC-TGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACA 142736 ||| ||| ||| | ||||| || |||||||||||||| |||||| |||| || || Sbjct 8181 TCGTGTGACATGGGT-CTCGGGGTGCCGTTCAACATTGCGTCGTACTCGCTGCTGAC--- 8236 Query 142737 GCTCATTGCTCGCGAATG----CGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCA 142792 | || ||| |||| || | ||| ||| | || || | || |||||| |||| Sbjct 8237 GATC-TTGATCGCAAAGGCGACCGGGCTGCGTCCGGGGGAGCTGGTGCACACCCTCGGTG 8295 Query 142793 ATTCGCACATCTAC 142806 | ||||| ||||| Sbjct 8296 ACGCGCACGTCTAC 8309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500436268481840