Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6969 313 2e-80 seq6968 313 2e-80 seq6967 313 2e-80 >seq6969 Length=25347 Score = 313 bits (346), Expect = 2e-80 Identities = 599/870 (69%), Gaps = 21/870 (2%) Strand=Plus/Minus Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGA 147514 || |||||| || || || ||||| || || ||||| || |||| || |||||| ||| | Sbjct 10981 CAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAA 10923 Query 147515 TTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574 | |||| ||| ||||| ||| || ||| || | || | ||| || || | | Sbjct 10922 TCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGT 10863 Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT-- 147632 |||||||||| ||| |||| ||| |||| |||||||||||| |||| || | || Sbjct 10862 TGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATCG 10803 Query 147633 -AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACC 147691 ||||| || ||||| || | | | |||| ||||||||| ||||| | Sbjct 10802 CAAACCA---CACCTCCTGTGCCTGGATCGTCTGCACTCCGCGGCCCTCCGCCTCGTAGC 10746 Query 147692 GCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCG 147751 ||||||||| ||||| ||||| ||||||||||| || || || || ||| | | Sbjct 10745 GCTCGTACAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTG 10686 Query 147752 GACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCC 147811 | |||||||| |||| | | || || ||||| ||| ||||| || || | || Sbjct 10685 GGTCCATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACAGGTCGGGGATCC 10626 Query 147812 ACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT 147871 |||||||||| | || |||||||| || || ||| ||||||| |||| Sbjct 10625 ACAGCGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCA 10566 Query 147872 TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTAC 147931 || | || |||||||||||||||| || || | ||| | ||| | || || || | Sbjct 10565 GCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTTGC 10506 Query 147932 GCTTTCCGCC---CTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTT 147988 |||| ||||| |||||| || | ||| || ||||||| |||||||||| ||| || Sbjct 10505 GCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCA 10446 Query 147989 CCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGT 148048 |||||||| ||| |||||||| ||| | ||| | ||||||| || || | | || Sbjct 10445 CCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTTGT 10386 Query 148049 GCACGTTAACGCCAATGCCGCC-GCCGTACTTTGAT-ATGGCAGCGCAATCGCCCAATGT 148106 |||||| | ||| |||||||| |||| | ||| | ||| | ||||| || || || Sbjct 10385 GCACGTGCAGGCCGATGCCGCCGGCCG--CCTTGCTGATGACGGCGCACTCCTTCAGCGT 10328 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGT-TTTTGACGCCAAGCAAAAAACACGAACACATTT 148165 |||||| ||||| |||||||||| || ||||| | | | || ||||| | ||| | Sbjct 10327 GTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACG-AGGAAGCACGAGCTCATCT 10269 Query 148166 GCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAA--TTTTTG 148223 |||| || |||| || || ||| ||||| || | |||||||| || || || | Sbjct 10268 GCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAAAAAGCCCTTCG 10209 Query 148224 ACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283 | ||||| ||||||||| ||| | || |||| || |||| ||||| || || Sbjct 10208 A--CATCAGATCGTACGTCTCACGCACGTTCTTGAGGTCGCCGACGTGGATGCCGAGGGC 10151 Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 ||||||| || | ||||| || ||||| Sbjct 10150 AACGCGCAGGAAGAGCTGCTGCGGGCGTTC 10121 >seq6968 Length=12362 Score = 313 bits (346), Expect = 2e-80 Identities = 599/870 (69%), Gaps = 21/870 (2%) Strand=Plus/Minus Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGA 147514 || |||||| || || || ||||| || || ||||| || |||| || |||||| ||| | Sbjct 10981 CAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAA 10923 Query 147515 TTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574 | |||| ||| ||||| ||| || ||| || | || | ||| || || | | Sbjct 10922 TCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGT 10863 Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT-- 147632 |||||||||| ||| |||| ||| |||| |||||||||||| |||| || | || Sbjct 10862 TGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATCG 10803 Query 147633 -AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACC 147691 ||||| || ||||| || | | | |||| ||||||||| ||||| | Sbjct 10802 CAAACCA---CACCTCCTGTGCCTGGATCGTCTGCACTCCGCGGCCCTCCGCCTCGTAGC 10746 Query 147692 GCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCG 147751 ||||||||| ||||| ||||| ||||||||||| || || || || ||| | | Sbjct 10745 GCTCGTACAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTG 10686 Query 147752 GACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCC 147811 | |||||||| |||| | | || || ||||| ||| ||||| || || | || Sbjct 10685 GGTCCATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACAGGTCGGGGATCC 10626 Query 147812 ACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT 147871 |||||||||| | || |||||||| || || ||| ||||||| |||| Sbjct 10625 ACAGCGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCA 10566 Query 147872 TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTAC 147931 || | || |||||||||||||||| || || | ||| | ||| | || || || | Sbjct 10565 GCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTTGC 10506 Query 147932 GCTTTCCGCC---CTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTT 147988 |||| ||||| |||||| || | ||| || ||||||| |||||||||| ||| || Sbjct 10505 GCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCA 10446 Query 147989 CCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGT 148048 |||||||| ||| |||||||| ||| | ||| | ||||||| || || | | || Sbjct 10445 CCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTTGT 10386 Query 148049 GCACGTTAACGCCAATGCCGCC-GCCGTACTTTGAT-ATGGCAGCGCAATCGCCCAATGT 148106 |||||| | ||| |||||||| |||| | ||| | ||| | ||||| || || || Sbjct 10385 GCACGTGCAGGCCGATGCCGCCGGCCG--CCTTGCTGATGACGGCGCACTCCTTCAGCGT 10328 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGT-TTTTGACGCCAAGCAAAAAACACGAACACATTT 148165 |||||| ||||| |||||||||| || ||||| | | | || ||||| | ||| | Sbjct 10327 GTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACG-AGGAAGCACGAGCTCATCT 10269 Query 148166 GCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAA--TTTTTG 148223 |||| || |||| || || ||| ||||| || | |||||||| || || || | Sbjct 10268 GCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAAAAAGCCCTTCG 10209 Query 148224 ACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283 | ||||| ||||||||| ||| | || |||| || |||| ||||| || || Sbjct 10208 A--CATCAGATCGTACGTCTCACGCACGTTCTTGAGGTCGCCGACGTGGATGCCGAGGGC 10151 Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 ||||||| || | ||||| || ||||| Sbjct 10150 AACGCGCAGGAAGAGCTGCTGCGGGCGTTC 10121 >seq6967 Length=22635 Score = 313 bits (346), Expect = 2e-80 Identities = 599/870 (69%), Gaps = 21/870 (2%) Strand=Plus/Plus Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGA 147514 || |||||| || || || ||||| || || ||||| || |||| || |||||| ||| | Sbjct 1218 CAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACG-TGTACTCCACAA 1276 Query 147515 TTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574 | |||| ||| ||||| ||| || ||| || | || | ||| || || | | Sbjct 1277 TCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGT 1336 Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT-- 147632 |||||||||| ||| |||| ||| |||| |||||||||||| |||| || | || Sbjct 1337 TGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATCG 1396 Query 147633 -AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACC 147691 ||||| || ||||| || | | | |||| ||||||||| ||||| | Sbjct 1397 CAAACCA---CACCTCCTGTGCCTGGATCGTCTGCACTCCGCGGCCCTCCGCCTCGTAGC 1453 Query 147692 GCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCG 147751 ||||||||| ||||| ||||| ||||||||||| || || || || ||| | | Sbjct 1454 GCTCGTACAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTG 1513 Query 147752 GACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCC 147811 | |||||||| |||| | | || || ||||| ||| ||||| || || | || Sbjct 1514 GGTCCATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACAGGTCGGGGATCC 1573 Query 147812 ACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT 147871 |||||||||| | || |||||||| || || ||| ||||||| |||| Sbjct 1574 ACAGCGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCA 1633 Query 147872 TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTAC 147931 || | || |||||||||||||||| || || | ||| | ||| | || || || | Sbjct 1634 GCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTTGC 1693 Query 147932 GCTTTCCGC---CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTT 147988 |||| |||| ||||||| || | ||| || ||||||| |||||||||| ||| || Sbjct 1694 GCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCA 1753 Query 147989 CCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGT 148048 |||||||| ||| |||||||| ||| | ||| | ||||||| || || | | || Sbjct 1754 CCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTTGT 1813 Query 148049 GCACGTTAACGCCAATGCCGCC-GCCGTACTTTGAT-ATGGCAGCGCAATCGCCCAATGT 148106 |||||| | ||| |||||||| |||| | ||| | ||| | ||||| || || || Sbjct 1814 GCACGTGCAGGCCGATGCCGCCGGCCG--CCTTGCTGATGACGGCGCACTCCTTCAGCGT 1871 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGT-TTTTGACGCCAAGCAAAAAACACGAACACATTT 148165 |||||| ||||| |||||||||| || ||||| | | | || ||||| | ||| | Sbjct 1872 GTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACG-AGGAAGCACGAGCTCATCT 1930 Query 148166 GCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAA--TTTTTG 148223 |||| || |||| || || ||| ||||| || | |||||||| || || || | Sbjct 1931 GCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAAAAAGCCCTTCG 1990 Query 148224 ACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283 | ||||| ||||||||| ||| | || |||| || |||| ||||| || || Sbjct 1991 A--CATCAGATCGTACGTCTCACGCACGTTCTTGAGGTCGCCGACGTGGATGCCGAGGGC 2048 Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 ||||||| || | ||||| || ||||| Sbjct 2049 AACGCGCAGGAAGAGCTGCTGCGGGCGTTC 2078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476551272099240