Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq9639 197 2e-45 seq9638 197 2e-45 >seq9639 Length=11758 Score = 197 bits (218), Expect = 2e-45 Identities = 418/614 (68%), Gaps = 16/614 (3%) Strand=Plus/Minus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| ||||| | |||||||||||| |||||||||||||||| || ||||||| Sbjct 8337 CCAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGT 8278 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 |||| | |||||||| || |||||| | | || | || | || |||||||||| Sbjct 8277 GCACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGT 8218 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 | || |||||||| || ||||| || |||||||| | ||| | ||| |||||| || Sbjct 8217 ACGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGATACAGCATGC 8158 Query 147086 ACGAGAGCTCC-------CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 | || | |||| |||| | ||||| ||||||| || | |||||| || || Sbjct 8157 AGGACAACTCCTTCGTGTCCGT-GTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGGGGG 8099 Query 147139 AGCGCCATGGCGGGCAGGTCCGC-GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-T 147196 || ||||| ||| || ||| |||||||| |||| || | |||||| | | || | Sbjct 8098 AGGGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGT 8041 Query 147197 CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGT 147256 |||||| |||| | |||| || | | | |||||||||||||| ||| ||| Sbjct 8040 TCGGGTTCGTCTTGAGGGTCTCGACAATTTGCTTGATCTGGTCCACGCCCTCGCCGTCGT 7981 Query 147257 AGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTG 147316 |||| | | || || |||| || || ||||| | ||||||||| ||||| || | Sbjct 7980 AGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACAG 7921 Query 147317 GCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGA 147374 | || ||||| ||| | | || ||||| || || | | |||||| | || Sbjct 7920 GGCCAAGGTCCATCTCCTTATTCTCCG-TCAGCCC-CCGGCTGTCCAAGAACTCGCGCGA 7863 Query 147375 CCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCC 147434 |||| | ||||||||||| | ||||| | | ||| | | || ||| || Sbjct 7862 GCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGTTGCGCGTTCGTCTCACC 7803 Query 147435 CCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAG 147494 || | ||||||| || |||||| | || || | ||| || || | ||| || ||||| Sbjct 7802 ACGCAGAAACCAGATCAACTCCTCGCACACGCCGCGCCAGAAAACGCGCTTCGTCGTCAG 7743 Query 147495 CAGGGGGAACTGGT 147508 ||| || | || || Sbjct 7742 CAGAGGCAGCTTGT 7729 >seq9638 Length=11764 Score = 197 bits (218), Expect = 2e-45 Identities = 418/614 (68%), Gaps = 16/614 (3%) Strand=Plus/Minus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| ||||| | |||||||||||| |||||||||||||||| || ||||||| Sbjct 8343 CCAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGT 8284 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 |||| | |||||||| || |||||| | | || | || | || |||||||||| Sbjct 8283 GCACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGT 8224 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 | || |||||||| || ||||| || |||||||| | ||| | ||| |||||| || Sbjct 8223 ACGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGATACAGCATGC 8164 Query 147086 ACGAGAGCTCC-------CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 | || | |||| |||| | ||||| ||||||| || | |||||| || || Sbjct 8163 AGGACAACTCCTTCGTGTCCGT-GTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGGGGG 8105 Query 147139 AGCGCCATGGCGGGCAGGTCCGC-GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-T 147196 || ||||| ||| || ||| |||||||| |||| || | |||||| | | || | Sbjct 8104 AGGGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGT 8047 Query 147197 CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGT 147256 |||||| |||| | |||| || | | | |||||||||||||| ||| ||| Sbjct 8046 TCGGGTTCGTCTTGAGGGTCTCGACAATTTGCTTGATCTGGTCCACGCCCTCGCCGTCGT 7987 Query 147257 AGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTG 147316 |||| | | || || |||| || || ||||| | ||||||||| ||||| || | Sbjct 7986 AGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACAG 7927 Query 147317 GCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGA 147374 | || ||||| ||| | | || ||||| || || | | |||||| | || Sbjct 7926 GGCCAAGGTCCATCTCCTTATTCTCCG-TCAGCCC-CCGGCTGTCCAAGAACTCGCGCGA 7869 Query 147375 CCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCC 147434 |||| | ||||||||||| | ||||| | | ||| | | || ||| || Sbjct 7868 GCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGTTGCGCGTTCGTCTCACC 7809 Query 147435 CCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAG 147494 || | ||||||| || |||||| | || || | ||| || || | ||| || ||||| Sbjct 7808 ACGCAGAAACCAGATCAACTCCTCGCACACGCCGCGCCAGAAAACGCGCTTCGTCGTCAG 7749 Query 147495 CAGGGGGAACTGGT 147508 ||| || | || || Sbjct 7748 CAGAGGCAGCTTGT 7735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583414633677600