Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6969 199 5e-46 seq6968 199 5e-46 seq6967 199 5e-46 seq9923 170 2e-37 seq9960 149 7e-31 seq5028 145 9e-30 seq5244 98.7 1e-15 >seq6969 Length=25347 Score = 199 bits (220), Expect = 5e-46 Identities = 760/1174 (65%), Gaps = 47/1174 (4%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGAC--GCCGGAGACCCCGCGAACGTCTCGTAC 80598 |||||||||| ||||| |||||||| ||| || || ||| |||||||||||| Sbjct 11344 CCACATGTCGAACTGCAGGATGCCCT--GACTGGCTGGGCTGCCCTTGAACGTCTCGTAG 11287 Query 80599 GGGCCCTCCGTCTTGGCCAGCTC---ACACGACTCCATAAGGGCCGCGTGATAAATGCAC 80655 ||||||||| ||| |||||||| |||||||| | ||| ||| || || Sbjct 11286 GGGCCCTCCTCCTTCGCCAGCTCCATCGACGACTCC---ACGGCGGCGAAGTAGATCGTT 11230 Query 80656 TCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATC 80715 || |||| || |||||| | |||||| ||| | |||| | || || || || Sbjct 11229 TCGAAGATCTCCGCGTTCACGCGCTGCGCCTCAGGGCTGGCGAAGGGCAGGCGCAGCAGG 11170 Query 80716 ATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGAT 80775 ||||| |||| |||||||| || ||||| | | | | |||||||| |||| |||| Sbjct 11169 ATGAAGGCGTCCGCCAGGCCTTGCACGCCCAGGCCCACCGGGCGGTTGCGCATGTTGCTG 11110 Query 80776 CG---CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGT 80832 || | ||| |||| | ||||| |||| || |||||||||||||| ||||| Sbjct 11109 CGGTACGCGGTCTCC---ACCGGGTAGTAGTTGCGGTCAATGACGCGGTTCAGATTGCGC 11053 Query 80833 GTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATT---GGTTCCCC---TTC 80886 || | | || || | || ||| |||| | | ||| || ||| Sbjct 11052 GTGATCTGCTTCGTCACGCTGTACAGCAGCTGGTGATCGATCTCGCGCTTCTCCTCATTC 10993 Query 80887 ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTA 80946 || || ||| ||| | ||| || || |||||||| || ||| || | || Sbjct 10992 ACGAAGCGCGGCAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTG 10933 Query 80947 AACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTT 81006 |||| || || || ||||| | || || |||| || || || ||||| |||||||| Sbjct 10932 TACTCCACAATCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTC 10873 Query 81007 GACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGAC 81066 |||||| |||||| |||||||||||| ||| ||||| |||||||||| ||| ||| Sbjct 10872 GACTTGCTGTTGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGAC 10813 Query 81067 TTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAAT---TTGCCTTCG 81123 | ||| || || ||| | ||| | |||| || | || | | | ||| || Sbjct 10812 TCGAGAATCGCAAACCACACCTCCTGTGCCTGGATCGTCT---GCACTCCGCGGCCCTCC 10756 Query 81124 GCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTG 81181 ||| | || |||| || | ||||||| | |||| | || ||| |||| | | Sbjct 10755 GCCTCGTAGCGCTCGTACAGGCGC-TCGAACTCCTCGCCGTAGCAG-TCACTGAGACCCG 10698 Query 81182 GGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAG 81241 ||||| | ||| |||||| ||| | || ||| || ||||||||| Sbjct 10697 GGCACGTACTTGGGTCCATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACA 10638 Query 81242 CGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGG 81300 ||| |||||||| || ||| ||| |||||||| ||| ||| || || | || | Sbjct 10637 GGTCGGGGATCCACAGCGCGTAGAAGAGGTCGCGCGCA-CGCTGGTCGTCCTTGCCGGTG 10579 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 ||| | || | || ||| | | |||||| || ||||| ||||| || || | |||| Sbjct 10578 TTGCGCTTCAGCAGCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCG 10519 Query 81361 ATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | | |||||||| || ||| ||||||| ||||| ||||| || ||| || || Sbjct 10518 AAGGCGCCCTTGCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACG 10459 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 |||| ||| || | | || | ||| |||||||| || |||| || | Sbjct 10458 CGCAGCATCGGCACCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCG 10399 Query 81478 GCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTT--TGAAATCTGAGCAC 81535 | ||| | ||| | || |||||||| || | | ||| ||| | | |||| Sbjct 10398 GAGCGGATGTTGTGCACGTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCAC 10339 Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTT---CATGTCAAGCAAGA 81592 || |||| || || || || || || ||||| || | || | | | || ||| Sbjct 10338 TCC--TTCAGCGTGTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGC 10281 Query 81593 AACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 | |||| |||||| || | | |||||| ||||| || || ||||| ||||| Sbjct 10280 ACGAGCT---CATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCG 10224 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686 ||||| | | || |||||||| || || || || Sbjct 10223 TGAAAAAGCCCTTCGACATCAGATCGTACGTCTC 10190 >seq6968 Length=12362 Score = 199 bits (220), Expect = 5e-46 Identities = 760/1174 (65%), Gaps = 47/1174 (4%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGAC--GCCGGAGACCCCGCGAACGTCTCGTAC 80598 |||||||||| ||||| |||||||| ||| || || ||| |||||||||||| Sbjct 11344 CCACATGTCGAACTGCAGGATGCCCT--GACTGGCTGGGCTGCCCTTGAACGTCTCGTAG 11287 Query 80599 GGGCCCTCCGTCTTGGCCAGCTC---ACACGACTCCATAAGGGCCGCGTGATAAATGCAC 80655 ||||||||| ||| |||||||| |||||||| | ||| ||| || || Sbjct 11286 GGGCCCTCCTCCTTCGCCAGCTCCATCGACGACTCC---ACGGCGGCGAAGTAGATCGTT 11230 Query 80656 TCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATC 80715 || |||| || |||||| | |||||| ||| | |||| | || || || || Sbjct 11229 TCGAAGATCTCCGCGTTCACGCGCTGCGCCTCAGGGCTGGCGAAGGGCAGGCGCAGCAGG 11170 Query 80716 ATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGAT 80775 ||||| |||| |||||||| || ||||| | | | | |||||||| |||| |||| Sbjct 11169 ATGAAGGCGTCCGCCAGGCCTTGCACGCCCAGGCCCACCGGGCGGTTGCGCATGTTGCTG 11110 Query 80776 CG---CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGT 80832 || | ||| |||| | ||||| |||| || |||||||||||||| ||||| Sbjct 11109 CGGTACGCGGTCTCC---ACCGGGTAGTAGTTGCGGTCAATGACGCGGTTCAGATTGCGC 11053 Query 80833 GTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATT---GGTTCCCC---TTC 80886 || | | || || | || ||| |||| | | ||| || ||| Sbjct 11052 GTGATCTGCTTCGTCACGCTGTACAGCAGCTGGTGATCGATCTCGCGCTTCTCCTCATTC 10993 Query 80887 ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTA 80946 || || ||| ||| | ||| || || |||||||| || ||| || | || Sbjct 10992 ACGAAGCGCGGCAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTG 10933 Query 80947 AACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTT 81006 |||| || || || ||||| | || || |||| || || || ||||| |||||||| Sbjct 10932 TACTCCACAATCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTC 10873 Query 81007 GACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGAC 81066 |||||| |||||| |||||||||||| ||| ||||| |||||||||| ||| ||| Sbjct 10872 GACTTGCTGTTGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGAC 10813 Query 81067 TTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAAT---TTGCCTTCG 81123 | ||| || || ||| | ||| | |||| || | || | | | ||| || Sbjct 10812 TCGAGAATCGCAAACCACACCTCCTGTGCCTGGATCGTCT---GCACTCCGCGGCCCTCC 10756 Query 81124 GCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTG 81181 ||| | || |||| || | ||||||| | |||| | || ||| |||| | | Sbjct 10755 GCCTCGTAGCGCTCGTACAGGCGC-TCGAACTCCTCGCCGTAGCAG-TCACTGAGACCCG 10698 Query 81182 GGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAG 81241 ||||| | ||| |||||| ||| | || ||| || ||||||||| Sbjct 10697 GGCACGTACTTGGGTCCATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACA 10638 Query 81242 CGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGG 81300 ||| |||||||| || ||| ||| |||||||| ||| ||| || || | || | Sbjct 10637 GGTCGGGGATCCACAGCGCGTAGAAGAGGTCGCGCGCA-CGCTGGTCGTCCTTGCCGGTG 10579 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 ||| | || | || ||| | | |||||| || ||||| ||||| || || | |||| Sbjct 10578 TTGCGCTTCAGCAGCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCG 10519 Query 81361 ATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | | |||||||| || ||| ||||||| ||||| ||||| || ||| || || Sbjct 10518 AAGGCGCCCTTGCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACG 10459 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 |||| ||| || | | || | ||| |||||||| || |||| || | Sbjct 10458 CGCAGCATCGGCACCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCG 10399 Query 81478 GCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTT--TGAAATCTGAGCAC 81535 | ||| | ||| | || |||||||| || | | ||| ||| | | |||| Sbjct 10398 GAGCGGATGTTGTGCACGTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCAC 10339 Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTT---CATGTCAAGCAAGA 81592 || |||| || || || || || || ||||| || | || | | | || ||| Sbjct 10338 TCC--TTCAGCGTGTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGC 10281 Query 81593 AACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 | |||| |||||| || | | |||||| ||||| || || ||||| ||||| Sbjct 10280 ACGAGCT---CATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCG 10224 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686 ||||| | | || |||||||| || || || || Sbjct 10223 TGAAAAAGCCCTTCGACATCAGATCGTACGTCTC 10190 >seq6967 Length=22635 Score = 199 bits (220), Expect = 5e-46 Identities = 760/1174 (65%), Gaps = 47/1174 (4%) Strand=Plus/Plus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGAC--GCCGGAGACCCCGCGAACGTCTCGTAC 80598 |||||||||| ||||| |||||||| ||| || || ||| |||||||||||| Sbjct 855 CCACATGTCGAACTGCAGGATGCCCT--GACTGGCTGGGCTGCCCTTGAACGTCTCGTAG 912 Query 80599 GGGCCCTCCGTCTTGGCCAGCTC---ACACGACTCCATAAGGGCCGCGTGATAAATGCAC 80655 ||||||||| ||| |||||||| |||||||| | ||| ||| || || Sbjct 913 GGGCCCTCCTCCTTCGCCAGCTCCATCGACGACTCC---ACGGCGGCGAAGTAGATCGTT 969 Query 80656 TCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATC 80715 || |||| || |||||| | |||||| ||| | |||| | || || || || Sbjct 970 TCGAAGATCTCCGCGTTCACGCGCTGCGCCTCAGGGCTGGCGAAGGGCAGGCGCAGCAGG 1029 Query 80716 ATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGAT 80775 ||||| |||| |||||||| || ||||| | | | | |||||||| |||| |||| Sbjct 1030 ATGAAGGCGTCCGCCAGGCCTTGCACGCCCAGGCCCACCGGGCGGTTGCGCATGTTGCTG 1089 Query 80776 CG---CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGT 80832 || | ||| |||| | ||||| |||| || |||||||||||||| ||||| Sbjct 1090 CGGTACGCGGTCTCC---ACCGGGTAGTAGTTGCGGTCAATGACGCGGTTCAGATTGCGC 1146 Query 80833 GTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATT---GGTTCCCC---TTC 80886 || | | || || | || ||| |||| | | ||| || ||| Sbjct 1147 GTGATCTGCTTCGTCACGCTGTACAGCAGCTGGTGATCGATCTCGCGCTTCTCCTCATTC 1206 Query 80887 ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTA 80946 || || ||| ||| | ||| || || |||||||| || ||| || | || Sbjct 1207 ACGAAGCGCGGCAGGGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTG 1266 Query 80947 AACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTT 81006 |||| || || || ||||| | || || |||| || || || ||||| |||||||| Sbjct 1267 TACTCCACAATCTCGGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTC 1326 Query 81007 GACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGAC 81066 |||||| |||||| |||||||||||| ||| ||||| |||||||||| ||| ||| Sbjct 1327 GACTTGCTGTTGCACGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGAC 1386 Query 81067 TTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAAT---TTGCCTTCG 81123 | ||| || || ||| | ||| | |||| || | || | | | ||| || Sbjct 1387 TCGAGAATCGCAAACCACACCTCCTGTGCCTGGATCGTCT---GCACTCCGCGGCCCTCC 1443 Query 81124 GCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTG 81181 ||| | || |||| || | ||||||| | |||| | || ||| |||| | | Sbjct 1444 GCCTCGTAGCGCTCGTACAGGCGC-TCGAACTCCTCGCCGTAGCAG-TCACTGAGACCCG 1501 Query 81182 GGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAG 81241 ||||| | ||| |||||| ||| | || ||| || ||||||||| Sbjct 1502 GGCACGTACTTGGGTCCATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACA 1561 Query 81242 CGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGG 81300 ||| |||||||| || ||| ||| |||||||| ||| ||| || || | || | Sbjct 1562 GGTCGGGGATCCACAGCGCGTAGAAGAGGTCGCGCGCA-CGCTGGTCGTCCTTGCCGGTG 1620 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 ||| | || | || ||| | | |||||| || ||||| ||||| || || | |||| Sbjct 1621 TTGCGCTTCAGCAGCAGGAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCG 1680 Query 81361 ATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | | |||||||| || ||| ||||||| ||||| ||||| || ||| || || Sbjct 1681 AAGGCGCCCTTGCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACG 1740 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 |||| ||| || | | || | ||| |||||||| || |||| || | Sbjct 1741 CGCAGCATCGGCACCAGGCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCG 1800 Query 81478 GCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTT--TGAAATCTGAGCAC 81535 | ||| | ||| | || |||||||| || | | ||| ||| | | |||| Sbjct 1801 GAGCGGATGTTGTGCACGTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCAC 1860 Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTT---CATGTCAAGCAAGA 81592 || |||| || || || || || || ||||| || | || | | | || ||| Sbjct 1861 TCC--TTCAGCGTGTCGTAGATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGC 1918 Query 81593 AACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 | |||| |||||| || | | |||||| ||||| || || ||||| ||||| Sbjct 1919 ACGAGCT---CATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCG 1975 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686 ||||| | | || |||||||| || || || || Sbjct 1976 TGAAAAAGCCCTTCGACATCAGATCGTACGTCTC 2009 >seq9923 Length=5125 Score = 170 bits (188), Expect = 2e-37 Identities = 184/243 (76%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| || |||||||| ||||||||||| ||| | || ||||| ||| | Sbjct 1448 ATCATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACCATTGCGCTGGAGGTCGAGGCC 1389 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | || | || ||||||| || ||||||||||||||||| || || || ||| Sbjct 1388 AGCGACACGATCGAGAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGAC 1329 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || |||||||| ||||| || ||||| | || || || || ||||| Sbjct 1328 CAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTAC 1269 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAA 27642 || |||| ||||| || || || || || || |||| || |||||||| ||| ||| Sbjct 1268 AACATCCAGAAGGAGTCGACGCTGCACCTTGTGCTGCGCCTGCGCGGTGGCCAA---TAA 1212 Query 27643 AGT 27645 ||| Sbjct 1211 AGT 1209 >seq9960 Length=1600 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||| ||||| || | || ||||| ||| | | Sbjct 489 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACGATCGCCCTCGAGGTCGAGGCGAGC 548 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || |||||||||||||| ||||| || || ||| Sbjct 549 GACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCAG 608 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| || ||||| | || || || || ||||| || Sbjct 609 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 668 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || |||| || |||||||| Sbjct 669 ATCCAGAAGGAGTCGACGCTGCACCTTGTGCTGCGCCTGCGCGGTGG 715 >seq5028 Length=838 Score = 145 bits (160), Expect = 9e-30 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| ||||| ||||| || | || ||||| ||| | | Sbjct 617 ATGCAGATCTTCGTGAAGACGCTGACCGGTAAGACGATCGCCCTCGAGGTCGAGGCGAGC 676 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || || |||||||||||||| || || || |||||| Sbjct 677 GACACCATCGAGAACGTGAAGGCGAAGATNCAGGACAAGGAGGGCATCCCGCCGGACCAG 736 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||| | || || || || ||||| || Sbjct 737 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACAAC 796 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 |||| ||||| || || || || || || |||| || ||| Sbjct 797 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTGCGCCTGCGC 838 >seq5244 Length=1098 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||| ||||| || | || ||||| ||| | | Sbjct 796 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACGATCGCCCTCGAGGTCGAGGCGAGC 855 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || ||||||||||||||||| || || || |||||| Sbjct 856 GACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAG 915 Query 27526 CAGCGTCTAATTTT 27539 ||||| || || || Sbjct 916 CAGCGCCTGATCTT 929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570238690596080