Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq26061 150 2e-31 >seq26061 Length=1673 Score = 150 bits (166), Expect = 2e-31 Identities = 296/433 (68%), Gaps = 5/433 (1%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| || ||||| ||||| || | |||||||||| | ||| ||||| | || || Sbjct 983 CAGGCAGGCGAAGTCGCAGTGCATGCCCTCGTCTCGGGAGATGTACTCGTTCGTGAACGT 924 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 || ||| |||||| || || ||||| | ||| || |||| | ||||||||| || || Sbjct 923 CAGCCCCGGCATCAGCCCCCGCTTCTTCAGCCAGAAGATCGAGCAGAACGACCCGGAGAA 864 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| || ||||| || | ||| ||||||| | | || ||| |||| ||| || Sbjct 863 GAAGATGCCCTCCACCGCTGCGAACGCGACGAGCCTCTCCGCGAACGTGGCGGAGCTGC- 805 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 ||| |||| || |||||||||| || | | | | ||| || ||| || || Sbjct 804 -CGA-TCCACTTGATGGCCCACTCGGCCTTCTTCGTGACGCACGGCACCGTCGAGATCGC 747 Query 17200 CTTAAATAATTTCTCTTTTTCCT-GTAGGTCGATTATATACGTATCGATGAGTAGGCTGT 17258 ||| || | | |||||||| || | || | || ||||| |||||||| || |||| Sbjct 746 CTTGAACAGCGTGTCTTTTTCGGCGTTGTTCT-TGATGTACGTGTCGATGAGCAGACTGT 688 Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318 || | ||||| || ||||| || || || ||||| || ||||| ||||| ||||| || | Sbjct 687 ACGTCTCGGAATGGATGTTTTCGATCGCGATCTGGAACCCGTAGAAGCACCGGGCCTCGG 628 Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378 || || | || ||| || || || || ||| |||||||||||| | Sbjct 627 GGATCTGGATGTCGTTCATGAACCGCGAAGCGAGGTTCTCGAGGACGATGCCGTCGGAAG 568 Query 17379 CGGCGAAAAACGC 17391 ||||||| ||||| Sbjct 567 CGGCGAAGAACGC 555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517290624690840