Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq8419 87.8 1e-13 >seq8419 Length=24428 Score = 87.8 bits (96), Expect = 1e-13 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 2724 CCACCACTGCATCATTAAACGCCGCTCATCCAAATGCTCGGAGGTATGGATATATGCCGC 2783 |||||| | ||| || | | ||||| || | ||||| | ||||| || || || Sbjct 18253 CCACCAGTTCATGATCAGCCTGCGCTCTTCGATGAACTCGGCCTTGTGGATGTACGCGGC 18194 Query 2784 ACGTACATTATTACGCTCTGAGTGGCTCAGTTGCCTCTCTATCGCGTCATCACTCCATAA 2843 || || || || || || |||||||| |||| ||| || || || |||| || Sbjct 18193 GCGGACGTTGTTGCGTTCCTTGTGGCTCATCTGCCGCTCAATGGCTGTGTCTGTCCACAA 18134 Query 2844 CCCCGACTCCCCCAACGCACCACGCGCCATAGTCCTAAACCCATGCCCACACACCTCGGT 2903 || ||||| || || | | ||||| | | ||||||||||||||| | ||||| Sbjct 18133 ACCTGACTCGATCAGTGCGCTGCAGGCCATCGAACGAAACCCATGCCCACAGATCTCGGA 18074 Query 2904 TTTAGTATCATAGCCCATCGCACGCAATGCGCTGTTTACCGTGTTTTC 2951 ||| || || || |||||| || | |||||||| ||||||||||| Sbjct 18073 TTTGGTGTCGTACCCCATCTTCCGAAGCGCGCTGTTCACCGTGTTTTC 18026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37065158157616