Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq18707 360 2e-94 >seq18707 Length=2802 Score = 360 bits (398), Expect = 2e-94 Identities = 501/699 (72%), Gaps = 5/699 (1%) Strand=Plus/Minus Query 145648 GGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTA 145706 |||||||| ||||| ||| || ||||| ||| ||||| |||||||||||| ||| Sbjct 2595 GGAAAGGGGCGGGG-CTCTCTCTCGAGCTGCTTCTTGAGGGGGTCCACGTGGTTGGTGTA 2537 Query 145707 GACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGC 145766 |||||||||||||| || |||||||| || || || | | || | || || Sbjct 2536 TACGTGCGCGTCCCCAAGCGAATGGATGAAATCGCCTGGTTTCAACCCGCACACGTCAGC 2477 Query 145767 GACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTC 145826 || | |||| ||||||||| || ||||||||||| || |||||||||||||| Sbjct 2476 GAGAAGCACCGTCAACAGGGAGTAAGAAGCGATGTTGAAGGGGACGCCCAGCCCCATGTC 2417 Query 145827 CCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAG 145886 | ||| || ||||||| || ||||||||||||||| || |||||||||||||| || Sbjct 2416 GCACGACCGTTGGTACATTTGACAGGAGAGCTCCCCGTTGGCGACGTAGAACTGGCAGAG 2357 Query 145887 GAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGAC 145946 | |||||| || ||||| ||||| | ||| |||| |||||||| || | ||||| Sbjct 2356 CACGTGGCACGGGGGCAGCGCCATCTCCTTCAGCGCCGCGGGGTTCCACGCCGAGAGGAT 2297 Query 145947 GAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCAC 146006 || || ||| |||||||| ||||||| |||| | | |||||||| || Sbjct 2296 GATCCGCCTATCGTCGGGGTTGGTCTTGATGGTGTGGATCACCTGCGCCAGCTGGTCGAC 2237 Query 146007 GCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTG 146066 ||||||||| ||| || | || |||| |||| | ||||||||||||| |||||| Sbjct 2236 GCCCTGCCCGGTGTAGTCGGCGTTCCGGTCCTTGTACTCCGCCCCGAAGTGCCGCCACTG 2177 Query 146067 GAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAG 146126 ||| ||||||| |||||||||||| |||||||||| | ||||| | | |||| Sbjct 2176 GAAGCCGTAGATGGGCCCCAGGTCGTTCTCCTCCCTGTGCTCGAGCCCCCTGCTGTCGAG 2117 Query 146127 GAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGA 146186 ||| || || | ||||| ||||||||||| ||||||| || | || | ||| Sbjct 2116 GAACTCGCGCGTGCCGTTTCCGTCCCAGATCCCGACGCCCTTCTCCTTCAGGACGTTGCC 2057 Query 146187 GTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCT 146246 ||||||| | ||| ||| |||||||| |||||| || |||||| | |||||| |||| Sbjct 2056 GTCCGTGCAGCCCTTGACGAACCAGAACAGCTCCTCCGCGACCCCGCGCCAGAACACCCG 1997 Query 146247 CTTGGTGGTCAGCAGGGGGAA---CTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAA 146303 ||| || |||||||| ||||| | | | |||| | |||| |||||| ||||| Sbjct 1996 CTTCGTCGTCAGCAGCGGGAACACCCCGTCGCGCAAGCTGTACCGCATCTGGTCGCCGAA 1937 Query 146304 GACGGACAGGGTGCCCACGCCCGTCCTGTCCCCCCTGCG 146342 | | || || |||||||| | ||| ||| |||| Sbjct 1936 CTTGCTGATCGTCCCGACGCCCGTTCGGTCGCCCTTGCG 1898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589786091288520