Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq8567 163 8e-36 >seq8567 Length=29384 Score = 163 bits (180), Expect = 8e-36 Identities = 332/480 (69%), Gaps = 16/480 (3%) Strand=Plus/Minus Query 13877 GGATGAATGCAACGGTACGCTGACGGCCTGCAAGCTGCGTCATGGAGACAGCAACGAGCT 13936 |||| ||||||| || ||| || |||||||| |||| || || |||||||| || Sbjct 1793 GGATCAATGCAAAGGCTGTCTGTCGTCCTGCAAGTTGCGATTCGGCGAGAGCAACGAACT 1734 Query 13937 GCCGTTCGGCGGTTTCCCCGGTACATCCCTTAT---CAGGAGCTGAT-ATGCGCCAGAAA 13992 | |||||||| ||||||| ||||| || |||||||||| |||||| || | Sbjct 1733 TTCCTTCGGCGGATTCCCCGCCGTGTCCCTCATTGCCAGGAGCTGACCATGCGCAAGCAC 1674 Query 13993 ACCATTGATGCCATCATGGCGCACGCCGCTGCGGAATATCCGCGCGAGTGCTGCGGCGTG 14052 | |||| || ||| |||||| || || ||||| |||||| ||||||||||| || Sbjct 1673 ATAATTGCGGCGATCCAGGCGCATGCGGCAGCGGAGTATCCGAAAGAGTGCTGCGGGCTG 1614 Query 14053 GTAGC--GCAGAAAAGCCGGGTTGAGCGCTATTTCCCCTGCCGCAACCTCTCAGCCGAGC 14110 | || || | | | |||| || || ||||| ||||| ||| || | | |||| Sbjct 1613 CT-GCTGGCTG-TAGGGCGGGCGCAGAAGTACTTCCCATGCCGGAACATCGCCACGGAGC 1556 Query 14111 CGACAGAGCATTTTCACCTTTCTCCTGAAGACTACGCAGCTGCCGAGGA-CTGGGGGACG 14169 ||| || | |||| ||| |||||| |||||||| || || ||||| ||||| || | Sbjct 1555 CGAACGAAGAGTTTCGACTTGATCCTGAGGACTACGCTGCAGCGGAGGACCTGGGCGA-G 1497 Query 14170 GTGGTGGCCATTGTTCACAGCCACCCTGACGCCACGACACAGCCG--AGCGAACTGGATA 14227 ||| | | |||||| ||| ||||| |||||||| | | |||| | || || || Sbjct 1496 GTGATCGGCATTGTCCACTCGCACCCGGACGCCACCAGCCGGCCGTCACCGCAC--GACT 1439 Query 14228 AAGCGCAATGTGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCGGAGGGGGATT 14287 || ||||| | ||| |||||||||| ||| || ||||| |||||||||| Sbjct 1438 TGGCCATGTGTGAGGTCACGGCCTTGCCCTGGCACATTCTGTCGTGGCCCGAGGGGGATT 1379 Query 14288 TACGCACTATTCAGCC-GCGCGGGGAACTGCCGCTACTGGAGCGCCCGTTCGTGCTTGGC 14346 | || || || ||| || | | || ||| || || |||||||||| || | |||| Sbjct 1378 TGCGGACGATCACGCCAACGGGCCGCAC-GCCACTGCTCAAGCGCCCGTTTGTACATGGC 1320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148209001353122