Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq2393 91.5 1e-13 >seq2393 Length=4323 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||| | || ||||| || || ||| | || || || |||| Sbjct 1123 ATGCAGATCTTTGTGAAAACTCTTACTGGCAAGACTATCACCCTTGAGGTGGAGTCGAAT 1064 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCG-TACCGGTTGACCA 24950 || | | |||| ||| ||| || ||| | | | ||| ||| | | ||| ||||| Sbjct 1063 GATACCATCGAAAATGTGAAGTCGAAGATT-CAGGACAAGGAGGGGATCCCGCCGGACCA 1005 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 |||||| | || | ||| ||||| || | |||||| || |||| || || |||| Sbjct 1004 GCAACGACTCATCTTTGCAGGCAAGCAGTTAGAAGATGGCAGGACTCTGGCTGACTACAA 945 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 ||| ||||| ||| | || ||||| | || | || ||||||||||| Sbjct 944 CATCCAGAAGGAGTCTACCCTTCACCTGGTTCTCCGCCTGCGCGGAGGT 896 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || ||||| || | || ||||| || || || | || || || |||| Sbjct 2155 ATGCAGATCTTCGTTAAGACTCTCACAGGCAAGACTATTACTCTTGAGGTGGAGTCGAAT 2096 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCG-TACCGGTTGACCA 24950 || | | |||| ||| ||| || ||| | | | ||| ||| | | ||| ||||| Sbjct 2095 GATACCATCGAAAATGTGAAGTCGAAGATT-CAGGACAAGGAGGGGATCCCGCCGGACCA 2037 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 |||||| | || | ||| ||||| || | |||||| || |||| || || |||| Sbjct 2036 GCAACGACTCATCTTTGCAGGCAAGCAGTTAGAAGATGGCAGGACTCTGGCTGACTACAA 1977 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 ||| ||||| ||| | || ||||| | || | || ||||||||||| Sbjct 1976 CATCCAGAAGGAGTCTACCCTTCACCTGGTTCTCCGCCTGCGCGGAGGT 1928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418103069372960