Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq2393 91.5 1e-13
>seq2393
Length=4323
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||| ||||| | || ||||| || || ||| | || || || ||||
Sbjct 1123 ATGCAGATCTTTGTGAAAACTCTTACTGGCAAGACTATCACCCTTGAGGTGGAGTCGAAT 1064
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCG-TACCGGTTGACCA 24950
|| | | |||| ||| ||| || ||| | | | ||| ||| | | ||| |||||
Sbjct 1063 GATACCATCGAAAATGTGAAGTCGAAGATT-CAGGACAAGGAGGGGATCCCGCCGGACCA 1005
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010
|||||| | || | ||| ||||| || | |||||| || |||| || || ||||
Sbjct 1004 GCAACGACTCATCTTTGCAGGCAAGCAGTTAGAAGATGGCAGGACTCTGGCTGACTACAA 945
Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
||| ||||| ||| | || ||||| | || | || |||||||||||
Sbjct 944 CATCCAGAAGGAGTCTACCCTTCACCTGGTTCTCCGCCTGCGCGGAGGT 896
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || ||||| || | || ||||| || || || | || || || ||||
Sbjct 2155 ATGCAGATCTTCGTTAAGACTCTCACAGGCAAGACTATTACTCTTGAGGTGGAGTCGAAT 2096
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCG-TACCGGTTGACCA 24950
|| | | |||| ||| ||| || ||| | | | ||| ||| | | ||| |||||
Sbjct 2095 GATACCATCGAAAATGTGAAGTCGAAGATT-CAGGACAAGGAGGGGATCCCGCCGGACCA 2037
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010
|||||| | || | ||| ||||| || | |||||| || |||| || || ||||
Sbjct 2036 GCAACGACTCATCTTTGCAGGCAAGCAGTTAGAAGATGGCAGGACTCTGGCTGACTACAA 1977
Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
||| ||||| ||| | || ||||| | || | || |||||||||||
Sbjct 1976 CATCCAGAAGGAGTCTACCCTTCACCTGGTTCTCCGCCTGCGCGGAGGT 1928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418103069372960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |