Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq18707 199 3e-46 >seq18707 Length=2802 Score = 199 bits (220), Expect = 3e-46 Identities = 402/589 (68%), Gaps = 8/589 (1%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAG-GTGTGCACAAAGTCTCC 20983 ||||| || ||||||||| |||| ||||| ||||| |||||| | || | || || || Sbjct 2559 AGGGGGTCCACGTGGTTGGTGTATACGTGCGCGTC-CCCAAGCGAATGGATGAAATCGCC 2501 Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043 || ||| || |||| ||||| || ||||| |||| ||| |||||||| Sbjct 2500 TGGTTTCAACCCGCACACGTCAGCGAGAAGCACCGTCAACAGGGAGTAAGAAGCGATGTT 2441 Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCC 21103 || ||||| || || ||||||||| |||| ||||||| || ||||| |||||||| Sbjct 2440 GAAGGGGACGCCCAGCCCCATGTCGCACGACCGTTGGTACATTTGACAGGAGAGCTCCCC 2381 Query 21104 CCGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 || ||||| ||||| || | ||||| || || || || |||||| | || | Sbjct 2380 GTTGGCGACGTAGAACTGGCAGAGCACGTGGCACGGGGGCAGCGCCATCTCCTTCAGCGC 2321 Query 21164 CGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC 21223 ||||||||||||||| | | | ||| |||| ||||| ||| | || || | Sbjct 2320 CGCGGGGTTCCACGCCGAGAGGATGATCCGCCTATCGTCGGGGTTGGTCTTGATGGTGTG 2261 Query 21224 CACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGT--CGGCCCCCCTG 21281 | ||| | ||||||||| || ||||| || ||||| ||||| ||| || || Sbjct 2260 GATCACCTGCGCCAGCTGGTCGACGCCCTGCCCGGTGTAGTCGGCGTTCCGG--TCCTTG 2203 Query 21282 TACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGG 21341 ||||||||||| || || | ||||||||| ||||| | |||||||| ||| ||| Sbjct 2202 TACTCCGCCCCGAAGTGCCGCCACTGGAAGCCGTAGATGGGCCCCAGGTCGTTCTCCTCC 2143 Query 21342 CGGTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 | || | || ||||| || | | | || |||| | |||| ||||||| || Sbjct 2142 CTGTGCTCG-AGCCCCCTGCTGTCGAGGAACTCGCGCGTGCCGTTTCCGTCCCAGATCCC 2084 Query 21401 TACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTC 21460 ||||| | ||| || || ||| ||| ||||| ||| ||||| | || ||| Sbjct 2083 GACGCCCTTCTCCTTCAGGACGTTGCCGTCCGTGCAGCCCTTGACGAACCAGAACAGCTC 2024 Query 21461 CTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAAC 21509 |||| |||| || | ||| ||||||| || || || | ||| || ||| Sbjct 2023 CTCCGCGACCCCGCGCCAGAACACCCGCTTCGTCGTCAGCAGCGGGAAC 1975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427570519536240