Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq21875 100 3e-16 seq29849 91.5 1e-13 >seq21875 Length=4161 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 ||| || | ||| | || ||||| || || ||||| || ||| || || || ||| Sbjct 231 CAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTTCTGCCGTC 290 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 |||||||| || || || ||||||| | ||||| ||||| || || ||||| ||||| Sbjct 291 CTCGAGCTGCTTTCCGGCGAAGATCAGTCTCTGCTGGTCGGGCGGGATCCCTTCCTTGTC 350 Query 139672 GGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| || || | | || | |||||| | | ||||||||||| ||| | ||| Sbjct 351 CTGGATCTTAGACTTCACATTCTCGATCGTGTCGTTTGACTCCACCTCAAGGGTGATCGT 410 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| ||||||| || || ||||| || ||||| Sbjct 411 CTTCCCGGTCAGGGTCTTCACGAAAATCTGCAT 443 >seq29849 Length=3363 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || ||||| ||||||||||| || ||| | |||| | Sbjct 1058 CGCAGCACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCG 1117 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || ||||| || || || || |||||| || ||||| || || || |||||||| ||| Sbjct 1118 TCCTCGAGTTGCTTTCCTGCGAAGATCAATCGCTGCTGGTCAGGCGGGATGCCTTCCTTG 1177 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | |||||| ||| ||| || || | || | | Sbjct 1178 TCCTGGATCTTCGACTTCACGTTCTCAATCGTGTCGTTGGACTCGACTTCGAGAGTGATC 1237 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||||| || || || || |||||||| Sbjct 1238 GTCTTGCCGGTCAGTGTCTTCACAAAAATTTGCAT 1272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495819607869600