Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq26061 179 5e-40 >seq26061 Length=1673 Score = 179 bits (198), Expect = 5e-40 Identities = 394/581 (68%), Gaps = 12/581 (2%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| |||||| | | | ||||| ||| | |||||||| || ||||||| || | Sbjct 406 TGTTCCCCATCCAGCACCCGGACATCTGGCAGATGTACAAGGCCGCGGAGGCCTCATTCT 465 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||||||||||||||| || ||| | |||||| | || |||||| | | | | Sbjct 466 GGACGGTCGAAGAGGTTGACCTGGCGGCCGACCTGAAGGACTGGGAGGGCC---TCAACG 522 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | |||||| | || || | ||| | | || ||||| |||| ||||| || |||| Sbjct 523 ACGGGGAGCGACACTTCATCACCCACGTCCTCGCGTTCTTCGCCGCTTCCGACGGCATCG 582 Query 125176 TCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCT 125235 || ||| || || | || ||| | || | || || |||| ||||| Sbjct 583 TCCTCGAGAACCTCGCTTCGCGGTTCATGAACGACATCCAGATCCCCGAGGCCCGGTGCT 642 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 | ||||| ||||| ||| ||| || ||| | || || || | |||| | || || | Sbjct 643 TCTACGGGTTCCAGATCGCGATCGAAAACATCCATTCCGAGACGTACAGTCTGCTCATCG 702 Query 125296 ACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACGGTG 125354 ||| |||||| | || | | || ||| ||| ||| || || || ||| |||||| Sbjct 703 ACACGTACAT-CAAGAACAACGCCGAAAAAGACACGCTGTTCAAGGCGATCTCGACGGTG 761 Query 125355 CCGTCTAT-ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTC 125413 |||| | ||| || ||||| | |||| || |||||||| | | | | Sbjct 762 CCGTGCGTCACG-AAGAAGGCCGAGTGGGCCATCAAGTGGATCGGCAGCTCCG---CCAC 817 Query 125414 GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTC-GGGTAGTT 125472 || ||| || || || || || ||||| || || |||||||||||||| || |||| ||| Sbjct 818 GTTCGCGGAGAGGCTCGTCGCGTTCGCAGCGGTGGAGGGCATCTTCTTCTCCGGGTCGTT 877 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 ||| | ||||| ||||| |||||||| || || ||||| || |||||| || |||| Sbjct 878 CTGCT-CGATCTTCTGGCTGAAGAAGCGGGGGCTGATGCCGGGGCTGACGTTCACGAACG 936 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 ||| || || |||||||||||| | ||||| ||||| ||| Sbjct 937 AGTACATCTCCCGAGACGAGGGCATGCACTGCGACTTCGCC 977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740694107921880