Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_004313.1 Length=40149 Score E Sequences producing significant alignments: (Bits) Value seq8567 178 3e-40 >seq8567 Length=29384 Score = 178 bits (196), Expect = 3e-40 Identities = 164/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 31015 GAGGTGCTGCATGAGCATGGAGCTGATGGTTAAAGCGATGAAAATTCGAGTGGGTAATCC 31074 |||||||||| ||||||||| || ||||| |||||||| |||| || || || || Sbjct 23305 GAGGTGCTGCGTGAGCATGGGCCTTATGGTCGCCGCGATGAAGCTTCGCGTCGGCAACCC 23246 Query 31075 ATTGCGAAAACTGGTTCTGATCAAGCTGGCTGATAATGCCAGCGATCAGGGTGAGTGCTG 31134 |||||| || ||||| |||||||||||||| || || || ||||| || |||||||| Sbjct 23245 ATTGCGCAAGCTGGTACTGATCAAGCTGGCCGACAACGCTAGCGACATCGGCGAGTGCTG 23186 Query 31135 GCCCAGCTACCAGCATATTGCTGACCAGTGCGAGATTAGCAAACGTTCTGTGATGAATCA 31194 ||| ||| ||||| ||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct 23185 GCCGTCCTATCAGCACATTGCCGACCAGTGCGAGATCAGCAAGCGTTCTGTCATGAATCA 23126 Query 31195 TATTGCGGCCCTTTGTGAGTCCGGGCTG 31222 || | ||| | |||||| | || ||| Sbjct 23125 CATCACAGCCTTGTGTGAGGCGGGACTG 23098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128295125995966