Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq7861 125 1e-23 seq35462 120 5e-22 >seq7861 Length=7269 Score = 125 bits (138), Expect = 1e-23 Identities = 81/89 (91%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 271732 TTTAGAATATGGCTCCGTGACCTGGACTCGAACCAGGGACCCAGTGATTAACAGTCACTT 271791 ||| ||| ||||||||||||| ||||||||||| |||||||| ||||||||||||| || Sbjct 7226 TTTTGAAATTGGCTCCGTGACCAGGACTCGAACCTGGGACCCAATGATTAACAGTCATTT 7167 Query 271792 GCTCTACCGACTGAGCTATCACGGAATTA 271820 |||||||||||||||||||||||||| || Sbjct 7166 GCTCTACCGACTGAGCTATCACGGAACTA 7138 >seq35462 Length=6070 Score = 120 bits (132), Expect = 5e-22 Identities = 74/79 (94%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 272871 ATGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTAAC 272930 ||||||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||| Sbjct 559 ATGGTGGGCCCAGTAGGACTCGAACCTACGACCAAGGGATTATGAGTCCCCTGCTCTAAC 500 Query 272931 CAACTGAGCTATAGGCCCT 272949 ||||||||||||||||||| Sbjct 499 CAACTGAGCTATAGGCCCT 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896498910903120