Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq23146 95.1 1e-14 seq7856 93.3 5e-14 >seq23146 Length=2068 Score = 95.1 bits (104), Expect = 1e-14 Identities = 181/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 6907 GTATATCTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCAGTCCAA 6966 ||| | ||||||||| | | ||||| ||||| || || ||||||||| | ||| Sbjct 432 GTACAGCTTGCCCGAGGACGACACTTTGGCGCCGTGGGTCAGGTGGCCGCCGTGGGCCAG 373 Query 6967 GGACATAGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGC 7026 | ||| |||| | | ||||| | |||| || || |||| || || ||| || Sbjct 372 GCTCATGCCGAGGATGGTGTCACCGGCGTTCAACAGCGCCAGGTACACCGCGCTGTTGGC 313 Query 7027 TTGTGAACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACG 7086 |||||||| || || || ||||| ||| ||| | || ||||| | || ||||| Sbjct 312 GGACGAACCGGAGTGCGGCTGCACGTTGGCGTAATCGGCACCGAACAGCTGCTTGGCACG 253 Query 7087 CTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCC 7146 ||| || || || |||| | || | | |||||||||| || || || ||||| Sbjct 252 CTCGATGGCGAGCACTTCGACCTTGTCCACGTGCTCGCAGCCGCCGTAGTAACGCTTGCC 193 Query 7147 CGGATATCCCTCAGCATACTTGTTGGT 7173 ||| || || || || ||||||||||| Sbjct 192 CGGGTAACCTTCGGCGTACTTGTTGGT 166 >seq7856 Length=25067 Score = 93.3 bits (102), Expect = 5e-14 Identities = 181/266 (68%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997 ||||| || || || |||||| | ||| | ||| | || | | || |||| | | Sbjct 991 CCGTGGGTCAGGTGACCGCCGTGGGCCAGGCTCATGCCCAGGATGGTGTCGCCCGCTTGC 1050 Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057 || || || |||| || || ||| ||||| || |||| || || || ||||| ||| Sbjct 1051 AGCAGGGCCAGGTACACGGCGCTGTTGGCTTGGGAGCCGGCGTGTGGCTGGACGTTGGCG 1110 Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC---GATTTCATCG 7114 ||| | | |||||||| || || || || || ||||| | ||| ||| || || Sbjct 1111 TAATCGGCGCCGAACAGTTCCTTGGCGCGGTCGATGGCCAGTTGCTCAACGATGTCGACG 1170 Query 7115 GCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTA 7174 | |||| ||||| || || || ||||||||||| || || || ||||||||||| Sbjct 1171 AACT---CGCAACCGCCGTAGTAGCGCTTGCCCGGATAGCCTTCGGCGTACTTGTTGGTC 1227 Query 7175 AAAATAGAACCCTGTGCTTTCATAAC 7200 | || ||||| || || | ||| || Sbjct 1228 AGAACCGAACCTTGAGCCTCCATCAC 1253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555089593377480