Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_005178.1 Length=37611 Score E Sequences producing significant alignments: (Bits) Value seq8416 408 1e-109 seq8567 154 4e-33 >seq8416 Length=35894 Score = 408 bits (452), Expect = 1e-109 Identities = 899/1335 (67%), Gaps = 27/1335 (2%) Strand=Plus/Plus Query 20926 GACCGCAACACCCCGCTCCAGGACGCCGAGGTCATCGGCGTGCCGGTAGCGGCCAACGTC 20985 || ||||| || || | ||| | ||||||| | | || || || || ||||||||| Sbjct 21216 GATCGCAATACGCCCATGAAGGCCACCGAGGTTCTGGTGGTTCCCGTTGCCGCCAACGTC 21275 Query 20986 CAGGTCTTCGCCGGCGCCATCGTCGTGGCGAACGCTACCGGGTTCGCCGTGGGCGGCAGC 21045 | ||||||| ||| | | || || || ||||| || || || || | || Sbjct 21276 CGCATCTTCGCGGGCTCTCTGGTAGTCGCTAACGCCACTGGTTTTGCTGCACCTGGTTCA 21335 Query 21046 ACCGCCACCGGCCTGACCTACCTGGGCCGCGCTGAGGAATACGTGGACAACCGCAATGGC 21105 |||||| |||||| ||||||| ||||| || || || | || |||||||| ||| Sbjct 21336 ACCGCCCTGGGCCTGTCCTACCTCGGCCGTGCCGAAGAGTCAGTCGACAACCGTGGCGGC 21395 Query 21106 GCGGATGGCGCCAAGGTC--GTCCGTGTGCGCCGCC-TG--AACGCCTTCAAGTGGGCGA 21160 || | ||| || | || ||| | | ||||| || || || ||| ||| | | Sbjct 21396 GCAGCTGGTGCT--GCTCAGGTC---GAGATCCGCCATGGCAAGGCATTCCTCTGGACCA 21450 Query 21161 ACGACGGCAGCGTCACCCAGGCGCACCTGATGAAACCCGCCTACATCGTGGACGACCAGA 21220 | ||||||| | ||||||||||| ||||| | || ||||| |||||||| || ||| | | Sbjct 21451 ATGACGGCACCATCACCCAGGCGTACCTGTTCAAGCCCGCTTACATCGTCGATGACGAAA 21510 Query 21221 CCGTCGCCGCCACGGACGGCACCGAAACCCGCTCCCCGGCCGGCCGCATCATCGGCGTCG 21280 |||| || || | || | || ||||| ||| | || || |||||| |||| | | Sbjct 21511 CCGTAGCGGCTGCTGATGCAGGCGGCACCCGATCCACTGCTGGACGCATCGTCGGTATTG 21570 Query 21281 AACCGGACGGCGTGTGGGTGGAATAACAGGCTCACCAAC--GGAGAACCGGACACATGCT 21338 | | ||||||||||||| || |||| ||| | |||| | | |||| | Sbjct 21571 ATACCAACGGCGTGTGGGTTGAGTAACTCCCTCTATATATAGGAGCGCATTGCGCATGTT 21630 Query 21339 GATCAACAAGCAGAGTCTCAACGCGGCATTCGTCGCGATCAAAACCATCTTCAACAACGC 21398 | |||||| || | || ||||| || || | |||||| | ||||||||||| Sbjct 21631 AGTTAACAAGTCCTCGATCCAGGCAGCATTTGTTGCCCTGAAAACCCTTTTCAACAACGC 21690 Query 21399 CTTCGCGGCGGCCCCCACCACCTGGCAGAAGATCGCCATGGAAGTGCCGAGCAACACCAG 21458 ||| ||| | || |||| | ||||| | |||||||||||| | ||||| |||| ||| | Sbjct 21691 CTTTGCGACCGCACCCAGCGCCTGGGAAAAGATCGCCATGAAGGTGCCAAGCACCACTGG 21750 Query 21459 CAGCAACGATTACAAGTGGTTGAGCACCTTTCCGAAGATGCGCCGCTGGATCGGCGCGAA 21518 | |||| || |||| || | ||||| || |||||||| ||| | |||| || Sbjct 21751 CGCCAACATGTATGCGTGGCTGTCGGCGTTTCCAAAAATGCGCCGTTGGGTTGGCGAAAA 21810 Query 21519 GGTGGTCAAGAACCTGAAAGCCTACAAGTACGTTGTCGAGAACGAGGACTTCGAGGCCAC 21578 | || |||| ||| || || | || ||| || || ||||| || || || || || Sbjct 21811 GCACGTTAAGAGCCTCAAGGCGTTCAGCTACACCGTAGAAAACGAAGATTTTGAAGCGAC 21870 Query 21579 CGTCGAGGTGGACCGCAACGACATCGAGGACGACCAAATCGGCATCTACTCGCCCCAGGC 21638 ||||| || ||||||||| | ||||| ||||| || | ||||| || |||||||||| Sbjct 21871 TGTCGAAGTTGACCGCAACCATATCGAAGACGATCAGTTGGGCATTTATGCGCCCCAGGC 21930 Query 21639 GAAGATGGCCGGTTACTCGGCGGCTCAGCTCCCGGACGAGCTGGTCTATGAAGCGGTCAA 21698 | | ||||| || | ||| || ||| | ||||| || | || | || ||| || Sbjct 21931 GCAAATGGCAGGCTTCTCAGCAAAGCAGTTGCCGGATGAAATCGTATTCGAGTTGGTGAA 21990 Query 21699 CGGCGCCTTCACCAAGCCCTGTTTCGACGGCCAGTATTTCATCGACACGGATCACCCTGT 21758 ||||| || ||| | || | |||||||||||| ||| ||||||| || ||| || Sbjct 21991 CGGCGGTTTTGGCAACCTGTGCTACGACGGCCAGTACTTCTTCGACACCGACCACGTCGT 22050 Query 21759 CGGTGATGCCTCGGTGAGCAACAAGGGCACCGCTCCGCTTTCCAACGCCAGCCAGGCGGC 21818 ||| || || |||||||| ||||| || ||||||||| | | |||||||| Sbjct 22051 CGGCACTGGTAGCGTCAGCAACAAAGGCACGGCGGCGCTTTCCATTACGACTCAGGCGGC 22110 Query 21819 GGCGAAGGCAGGTTATGGCGCTGCTCGCACTGCGATGAAGAAGTTCAAAGACGAGGAAGG 21878 || |||| | |||||||| || ||||| || ||| |||||||| ||||| || || Sbjct 22111 AGCCAAGGGCAGCTATGGCGCAGCACGCACCGCCATGGGCAAGTTCAAGGACGATGATGG 22170 Query 21879 ACGTTCCCTCAACGTCTCCCCCAAC-GTGCTCCTGGTCGGCCCGGCGCTGGAAGACGTGG 21937 ||| | || | || | |||||| | |||||||||||||| | |||||||| | Sbjct 22171 CCGTCCTCTGGATGT-GCGCCCAACAATCCTCCTGGTCGGCCCAGGTTTGGAAGACACCG 22229 Query 21938 CGAAGATGCTGCTCACCAACCCGAAGCTCGCGGACAACACCCCGAACCCCTACGTCGGCA 21997 | || | |||| || | ||| || |||| |||| || | Sbjct 22230 CCCGCGCCTTGTTGACCAGTGATCGCCTGGAAGACGGCAAGGTCAACCTCTACAAGGGTA 22289 Query 21998 CTGCTGAGCTGGTAG--TGGACGGGCGTATCGAGTCCGACACCGCCTGGTTCCTGCTGGA 22055 |||| ||| |||| | | ||| |||||| ||||| || ||||||||||| ||||| Sbjct 22290 CTGCCGAGTTGGTCGTCTCGAC--TCGTATCACCTCCGATACGGCCTGGTTCCTCCTGGA 22347 Query 22056 CACCACCAAGCCGGTAAAACCGTTCATCTTCCAGCCCAGGAAGCAGCCGGAATTCGTTTC 22115 ||| | |||||| ||| || ||||||| |||| | ||| || | ||||| Sbjct 22348 CACAAGCAAGCCCGTACGCCCCTTCATCTACCAGGAGCGCAAGGCTCCAGTCTTCGTCCA 22407 Query 22116 CCAGGTCAACCTGGATTCGGATGACGTCTTCAACCTGCGCAAG---CTGAAGTTCGGCGC 22172 ||| | | | || | || ||||| |||| |||||| | |||||||| || Sbjct 22408 GCAGACCGATCCCGAAGCTGAAGACGTTTTCA---GTCGCAAGAAATTCAAGTTCGGGGC 22464 Query 22173 CGAAGCCCGCGCTGCTGCCGGTTACGGCTTCTGGCAGCTGGCCTATGGCTCCACCGGCAC 22232 ||||| || || || | ||||| ||||||||||| ||||||| ||||| || ||| Sbjct 22465 AGAAGCACGGGCGGCCGGTGGTTATGGCTTCTGGCAACTGGCCTTCGGCTCGACTGGC-- 22522 Query 22233 TGGCGCATAAGGGGG 22247 | || |||||||| Sbjct 22523 -GAAGCGTAAGGGGG 22536 Score = 271 bits (300), Expect = 2e-68 Identities = 296/393 (75%), Gaps = 0/393 (0%) Strand=Plus/Plus Query 1366 GTAAAGACGAAGCGAGGGCTTGAACATGGCCCGCCGCAAAGACGATCGAACGCTGGACAT 1425 |||||| | | ||| || |||||||| || ||||| || |||| | ||||| Sbjct 1429 GTAAAGCGGCAAGGAGTGCCTGAACATGCGTAACCAAAAAGATGACAGAACATTAGACAT 1488 Query 1426 CTTCGATGTTCCGCAGCCGGCCCGCGCTATACCTGGTGAGTGCAACTACGCCGCCCAGGT 1485 |||| |||||||||||||| | ||||||| ||| | ||||||| ||||||||||| Sbjct 1489 CTTCTCTGTTCCGCAGCCGGTGCTTTCTATACCCGGTCACGGCAACTATGCCGCCCAGGT 1548 Query 1486 CAGCGAACTGGTCAGTGAAATTCTGAAGGCTTGCGACCTTGACCGTTACGAGGTCGCCGC 1545 |||||| |||||||| ||| | || || | | |||| | ||||| || ||| | || || Sbjct 1549 CAGCGAGCTGGTCAGCGAAGTCCTCAAAGAGTCCGACTTGGACCGCTATGAGATTGCGGC 1608 Query 1546 CCGCATGTCGCGCCTGTCCGGCGATGACGTGAGCAAGAACATGCTCGACGCCTGGTCGAG 1605 |||||||| ||||| || ||||| ||||| |||||||||||| | ||||||||||| || Sbjct 1609 TCGCATGTCACGCCTTTCGGGCGACGACGTTAGCAAGAACATGTTAGACGCCTGGTCAAG 1668 Query 1606 TCCCGCCCGAGCTGATCACAACTTGCCTTTCTACCGAGCCGCCCTCCTAGAGGACGTCTG 1665 ||| ||||| || ||||||||| | ||| | || ||||| || | || ||||| ||||| Sbjct 1669 TCCTGCCCGTGCAGATCACAACCTACCTCTGTATCGAGCTGCTTTGCTGGAGGAAGTCTG 1728 Query 1666 CGCGAGCCATCTGCTGACCAACTGGCTGGTCGATGTGCGTGGCGGCCGCGTGGCTTACGG 1725 || |||||| | ||||| || |||| || | |||| || ||||| || ||||| || Sbjct 1729 TGCAAGCCATGTCCTGACGAATTGGCAAGTACACCTGCGCGGTGGCCGGGTCGCTTATGG 1788 Query 1726 CCGCGATGCACTGCTCGCCGAACTGGGCCGCCT 1758 ||||| || ||| ||| ||| | || ||||| Sbjct 1789 GCGCGAGGCTCTGGACGCGGAAATAGGTCGCCT 1821 Score = 150 bits (166), Expect = 4e-32 Identities = 140/174 (80%), Gaps = 8/174 (5%) Strand=Plus/Plus Query 9415 CGGCCAAGAACCGCA--CCGTCCACTGAGCGAAACCGCCCCGGCCTAGCCGGGACGGTCT 9472 |||||| |||| | || | |||| ||||||||||||||||| | || |||||||||| Sbjct 8662 CGGCCAGGAACAACTTGCCCTGCACTAAGCGAAACCGCCCCGGCGT-GCTGGGACGGTCT 8720 Query 9473 GCCGGACGTGGTGGTCCGGTACTGATGAGCAGCCACCCATGACGAACGA---ACCAAGAC 9529 |||||||||||| |||||||||||||||||||||||||||||| |||| ||| | || Sbjct 8721 GCCGGACGTGGTTGTCCGGTACTGATGAGCAGCCACCCATGACAGACGAAACACCCAAAC 8780 Query 9530 AGACCGCCAGCGCCGCCTGGCGCGGGAACGCCAACGAGCGAAGCGCGAGCGCGA 9583 || ||||| ||||||||| || ||||| |||| || |||| ||||||| Sbjct 8781 AG--CGCCAAACCCGCCTGGCACGCGAACGTAAACGTGCCCAGCGTAAGCGCGA 8832 Score = 118 bits (130), Expect = 3e-22 Identities = 315/473 (67%), Gaps = 29/473 (6%) Strand=Plus/Plus Query 3264 GCATGAAATCAAGGCACTGCGCCCGTTCATTCGCCGCGACTTCACCAAGCTACT---CCC 3320 ||| ||| |||| || |||| || |||| |||||| | ||||||| | ||| Sbjct 2615 GCAGGAACTCAAAGCCCTGCAACCATTCAAGCGCCGC---TCCACCAAGAGCATGTACCC 2671 Query 3321 GACCGACGTCTATTCCTGCGACGGCCACACGTTCGACGCCGAGGTCCAGCACCCGATGCA 3380 | |||||| | || ||||||||||| ||| || || ||||| | |||| | ||| Sbjct 2672 GTGCGACGTATTCACCGCCGACGGCCACAAGTTTGATGCAGAGGTATTGAACCC-ACGCA 2730 Query 3381 C-GGCCGGCCCTTCCGGCCGGAAATCACCACCATCATCGACATCCGTACCCGTCGAATTC 3439 | ||| ||| | ||| |||||| |||||| || |||| || ||| || || | Sbjct 2731 CCGGCAAGCCTTACCGCCCGGAAGCAACCACCGTCCTCGATGTCGCTACTCGC--AAGGC 2788 Query 3440 CG--GGATGGTCCACCGGCCTGGCCGAGTCGGCCCTGGTGGTGGTCGATGCCCTACGTGA 3497 || || |||| || ||||||||| || | | || | || ||||| ||||| Sbjct 2789 CGTGGGTATTTCCATTGGTGAGGCCGAGTCCACCATCGGCGTTATGGACGCCCTGCGTGA 2848 Query 3498 CGCC-TGCATCAAGGGCGGCGTCCCGGCCATCTTCTACGTGGACAACGGCTCGGGCTACG 3556 |||| |||| || |||| | || | |||||||| |||||||| || |||| | Sbjct 2849 CGCCATGCAGCA----CGGCATGTTTGCGGTGTTCTACGTTGACAACGGTTCCGGCTTTG 2904 Query 3557 TCAACCACATGATGCGCGACGAGGCGGTCGGCCTTATGGGCCGCCTGGGCATCGATATGA 3616 |||| ||| | || || | | ||| || | | ||| |||| ||||| Sbjct 2905 CCAACGACACCGTACGTGAAGTAG---TCGACCGTCTCGGC------GGCAC---TATGA 2952 Query 3617 AGAACAGCCTGCCCTACAACAGTCAGGCGCGGGGTGTGATTGAGCGCGTCCACCAGAGCC 3676 | | ||||||||||||| ||||| || || | |||||||| |||||| | Sbjct 2953 CCCATGCCTTGCCCTACAACAGCCAGGCCCGCGGCCTCATTGAGCGTTCCCACCAAACGA 3012 Query 3677 TGTGGATTCGCGCCGCCAAGGAACTGCCCGGCTACATCGGCGCCGACATGGAC 3729 | ||| | || |||||| | ||| || ||||||||||||||||||||||| Sbjct 3013 TTTGGGTCAATGCAGCCAAGAAGCTGACCAGCTACATCGGCGCCGACATGGAC 3065 Score = 111 bits (122), Expect = 4e-20 Identities = 271/402 (67%), Gaps = 14/402 (3%) Strand=Plus/Plus Query 180 ATCCAGCGGCTAGCCCATACAACCCTTCCGATGATCTCCAGGTCCGACAGCTTTGCCTTT 239 ||||| | || ||||| ||||| | ||| | ||||| ||||| ||| ||| | || Sbjct 255 ATCCAACCGCCCGCCCAAACAACACGTCCCACAATCTCTAGGTCATTCAGGTTTTCTTTA 314 Query 240 GGGACAATCATT-TCGGTATAGGCCTTGTTTTCGCTGATGATCGACACCGACCCGTCAAA 298 | || |||| || | ||| ||| |||| ||||||| | | || ||| ||| Sbjct 315 GAAACCTTCATGGTCTG-ATAAGCCGCGTTTGCGCTGATAACTGCTACGCCACCGCCAAT 373 Query 299 GCGCCTTTGCAGGCGCTTTGCATAGAGATGGTCATCCAGGCGAACGACGTAGA---CTGC 355 | | |||||| ||||| || || ||||||||||||| ||||| ||||||| || | Sbjct 374 CTGGCGTTGCAGCCGCTTGGCGTACAGATGGTCATCCAAGCGAATAACGTAGATGGCTTC 433 Query 356 CGCGTCTTGGACCGTT--GACTTGGTGTGATCCACAAGCACTGTATCGCCATCGCACAGC 413 | | || || | ||| ||| |||| || | | ||| || |||||||| | |||| Sbjct 434 CCCTTCCAGG-CTGTTGCGAC----TGTGGTCGATCAACACAGTGTCGCCATCACTCAGC 488 Query 414 AGAGGCTCCATAGAGTCACCGCCAATGCGGATCGCTGAGATACTGGAGGGGTCCAAGCCC 473 | |||||||||||||||| | | ||||| || |||| | || || ||||| ||| Sbjct 489 ACCCCCTCCATAGAGTCACCGTCCACCCGGATAGCCGAGAGCTTCGACGGCTCCAATCCC 548 Query 474 TTTTTTCGCAGGCTGTACCGGGTGAATGCCAGATTCACAAGCACGGTGGCGCCGTCGGTC 533 | || |||| ||| ||| || ||||| | | ||| || || || || ||| Sbjct 549 TGCTTGCGCAATGAGTAAGTGGTAAAAGCCAGGTGCGTAAGAACCCGAGCCCCCTCTGTC 608 Query 534 CAGGAACCGTGCCCTGCGCT-CACCTGGCCGTCATAGAGGGG 574 || | ||||| || || || || | | |||| || ||||| Sbjct 609 CATGCCCCGTGACCGGCACTGCAAC-GAGCGTCGTAAAGGGG 649 Score = 104 bits (114), Expect = 6e-18 Identities = 220/322 (68%), Gaps = 11/322 (3%) Strand=Plus/Plus Query 9830 AAAATCCACATCGCCAAGGCCCAGCTGGGCATGGACGATGACACCTATCGCGCATTGCTC 9889 || ||||||||||||||| | || || |||| ||||| ||||| ||||| ||| | Sbjct 9061 AAGATCCACATCGCCAAGAAGGACCTTGGGCTGGATGATGAAACCTACCGCGCCTTGTTG 9120 Query 9890 GCTCGCGTCGCGGGCGTGCGCTCGGCCAAGGACTTAGGGCCGCGCCAGATTGACCAGGTA 9949 | ||||| || | ||||| |||||||| || | ||| |||||||| | | |||| Sbjct 9121 GGCCGCGTGGCAGATGTGCGTTCGGCCAAAGATCTGACGCCACGCCAGATCGGCGCGGTA 9180 Query 9950 CTGGTGGAACTCCAGCGTCTGGGCTGGAAAC---CGAAGAGCAACCGGCAAGGCCGGGCG 10006 |||| || || || ||||||||| | | | ||| || |||||| | || Sbjct 9181 CTGGCCGAGTTCGCTCGCCTGGGCTGGGAGCCTACAAAGGCTAAAAAGCAAGG--GCGCA 9238 Query 10007 ACGCCAAAAGTGCCG---CAAAACCG-GCAAACCGTGCTGCGCAAAATCACCGCGCTCCT 10062 | | || |||| || | | |||| | ||| | || || | ||||| || | || Sbjct 9239 AAG-CACCAGTGGCGGCTCCAGACCGTGTAAAAC-TGGTGGGGAAAATAGAGGCCTTTCT 9296 Query 10063 GGCCAGCGCCCATCGCCCCTGGAGCTACGCCGACCATATGGCCCGGCGCATGTTCCAGGT 10122 || || | || ||||| ||| |||||| |||||||| |||||||||| |||| Sbjct 9297 CTCCGAGGCAAAGCGTTCCTGGGCCTATGCCGACGGTATGGCCCTGCGCATGTTCAAGGT 9356 Query 10123 CGAGCGGGTCGAGTGGCTGGAC 10144 ||| || ||||| ||||| ||| Sbjct 9357 CGAACGCGTCGAATGGCTAGAC 9378 Score = 89.7 bits (98), Expect = 1e-13 Identities = 390/604 (65%), Gaps = 26/604 (4%) Strand=Plus/Plus Query 6921 TGCTCGCCGCTGAGGTGGCCCGCAGCAGCCAGACGAAAGCCGGCGAGGCAATCGGCATGA 6980 |||| ||||| || || ||| ||||| | || || ||| | || |||||||||| Sbjct 5330 TGCTTGCCGCCGAAGTTGCCGCCAGCAATAAAACCAAGGCCAGTCAGCGCATCGGCATGA 5389 Query 6981 GCCGTTCGACCGTCAGCACCATCCTCGCCAACCGCTACCCGTCGCCCTCGACGATCCGCG 7040 |||| | |||||||| ||||| |||||||||||| |||||| || ||| Sbjct 5390 GCCGCACAGCCGTCAGCTTGATCCTGGCCAACCGCTACAGCTCGCCCAGCACCTCTGGCG 5449 Query 7041 TCGAGCGTCGTGTCCTGGCCGCGCTGAGCCGCATTGAGTGCCCGGCCCTGGGCGAGGCGG 7100 |||||||||| || ||| | ||| | || ||||| ||| || |||| |||| | Sbjct 5450 TCGAGCGTCGGGTAATGGAAACCCTGGGGCGAATTGAATGCATCGCACTGGACGAGACCA 5509 Query 7101 TGACCTCGGTCGAGTGC---AGCGAGTACCTCCAGCGGCCGGCGCCGCTGAACAACCCCG 7157 | ||| | | | ||||| ||| |||| | | || || ||| ||||||| Sbjct 5510 TCACCACCGACCAGTGCCAAAGC---TACCGCGAAAAACCCGCACCGACCCACAACCCGC 5566 Query 7158 TCGCGATGCGCTGCTGGAAAGCGTGCCGCGCCTGTCCACGCAA-CCCGCATACCGCCCCC 7216 ||||||| |||| || |||| ||| ||| ||| |||| | | || || Sbjct 5567 AGGCGATGCAGCACTGGCGCGCCTGCCAACACTGCCCAATCAACCCCGACTGCTGCAACC 5626 Query 7217 ATGA-AACG-AGAGGAACAAGGCCATGAGAACCGCATTGCCCTTGAAAGTGTTGACTCCT 7274 | || |||| | | | ||| || ||| | | || |||||||| ||||||| Sbjct 5627 AGGAGAACGCTCATGCTCGCCTCCACTAG--CCGTAAT-CCGTTGAAAGTCCTGACTCCG 5683 Query 7275 GACTTGGCCCAGAGCCTGCGCACCTTCAACGACGCCGCCCGGCTGCTCCAGCGCATGGGG 7334 ||||| | | ||||||| ||||||| ||||||||| | ||| | ||| Sbjct 5684 TCGCTGGCCGACCGTCTGCGCATTTTCAACGCCGCCGCCCGCAACTTGCAGGCCCACGGG 5743 Query 7335 GTCCGCCTTCATCGCCTGGAGCCGACAGAGGGGCG---CGTGACCATCGCCGCAGATGAC 7391 | ||| | || || | | ||| | || || |||| || ||||| || Sbjct 5744 ATTCGCGTGCAGGGCTTTCATCCGGCTGATAACCGATTGGTGATCA-CGCCG-----GAA 5797 Query 7392 GCCCGCCAGCTCCTGGAGAA---AGGCTAC-CTGATGGGCTTCCAGCGCGACGCCTCGGC 7447 ||| | |||| ||| || ||| || | || ||||| || ||| ||| | |||| Sbjct 5798 GCCGGTCAGCGGCTGATCAACCTTGGCCACACCGA-GGGCTATCAACGCCACGGCACGGC 5856 Query 7448 CGGCAGCACCCGTTACATCACCCGCTTCCAGGGCATCACCCTGGCCTGGAGCGAACCGAT 7507 ||| |||||||||| || | | ||||||||| | ||||||| ||| ||||||| || Sbjct 5857 CGGTAGCACCCGTTTCAACGTGCAGTTCCAGGGCGTGACCCTGGAATGGCGCGAACCCAT 5916 Query 7508 CAGC 7511 ||| Sbjct 5917 TAGC 5920 >seq8567 Length=29384 Score = 154 bits (170), Expect = 4e-33 Identities = 133/162 (82%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 26466 CGATGCAGGAAGCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 26525 ||||||||||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct 4898 CGATGCAGGAAGCCACCGGCAAGGCTGTGAGCGAGACTGTCGCCGAGTTCTCCAAGCTGG 4839 Query 26526 CCGACGAACCGGTCAAAGCCTC-GCAGCAACTCAACGAGAAATATCACTACCTGACCGCC 26584 | ||||| ||||| || ||||| || || || |||||| | || ||||| ||||| || Sbjct 4838 CAGACGACCCGGTAAAGGCCTCTGCTGC-GCTGAACGAGCAGTACCACTATCTGACGGCT 4780 Query 26585 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAGCAAGGCGAT 26626 ||||||||| |||||| ||||| || || ||||| |||||| Sbjct 4779 TCGGTTTACTCGCAGATTGCCGCACTGGAGCAGCAGGGCGAT 4738 Score = 91.5 bits (100), Expect = 4e-14 Identities = 409/638 (64%), Gaps = 20/638 (3%) Strand=Plus/Minus Query 27412 GACCAGGTCACCGCAGCCTATGAGGGGGAAATCCAGGCGCTGGAGGCGCTGCGCGACAAA 27471 ||| |||| |||||||||||||||| || || || |||||||| | | ||| Sbjct 4017 GACGAGGTGACCGCAGCCTATGAGGCCGAGATTGCCGCCCTGGAGGCCGTCAAAGGCAAG 3958 Query 27472 AGTTCCACCACGGCGGCCCAGCGCATCAGCCTGGACCAGAAGATCGCCGAGGCCAGGAAC 27531 | ||||| || || |||||| ||||| |||||||||||||||| || || | Sbjct 3957 AAGTCCACGACTGCTGCCCAGAGCATCCAGTTGGACCAGAAGATCGCTGACGCGCGCGCA 3898 Query 27532 AACATGGTCAAGGCGCAGAAGAAGGCCGACGCCGACCTGGAAGTCCT--CCAGCTCAACG 27589 ||||||||||||||||| |||||||| | | || || || | ||| ||||| Sbjct 3897 GGGATGGTCAAGGCGCAGAAAGAGGCCGACAACCAGCTTGAGGTGTTGGCCA--CCAACG 3840 Query 27590 AACAGGGCCGCCTGAAGAAACAGGCCCAGGCAGTCAAGGCCTACAGCGACGCGCTCCAGC 27649 | || |||||| | |||| | | || ||| ||||| | || || | Sbjct 3839 AGACCGGACGCCTGGCCGAGCAGGAACGGTCAATCACCACCTACGTGCAGGCCCTGGCTC 3780 Query 27650 AACAACAGGATGCGCTGGCCCTCCAGGGTCAACGTGCCGCCGCTGCCGTGGGCATGGGCG 27709 | |||||| || |||| || || ||||| || | || ||||||| ||| | Sbjct 3779 AGCAACAGCGAGCCCTGGAACTTGCCGGCCAACGCGCAGTACTTGGCGTGGGCCAGGGGG 3720 Query 27710 --CGCAACAGCGC-CGCTTGTTCGATCAGCGTGGCAGCCTTGACGACCGATTCGCGCAGC 27766 ||| | | ||| | | ||| | | ||||| | ||||| || || |||| Sbjct 3719 ACCGCCAGAACGCACTCAACGGCGAACTG---AACAGCCAGCAAGACCGGTTTGCTCAGC 3663 Query 27767 AGCGCCTGGACCTGGCGAGCCAGTACGGTGACGGCTCGCGAGGCATGAGCCTCGACGAGT 27826 || ||||| |||| | |||| | ||| ||||| |||| || |||| Sbjct 3662 AGTCGCTGGAGTTGGCCAACCAGAAATCCGACCCGTCGCGCAACATGTCGGAGGAGGAGT 3603 Query 27827 ACAA-CGACAAGCTCAAGGCGCT---GGAAGCTAACCATGCCGCGA-TGACCCAGCAGCT 27881 ||| ||| || | | ||||||| || || ||| | ||||| | |||| ||| | Sbjct 3602 TCAAGCGAAAATC-CCAGGCGCTCGCAGATGCGAACAAGGCCGCCACTGAC----CAGAT 3548 Query 27882 GCAACGCAACTACGCCGACCTCCAGGCCGCCCAGGGCAACTGGGTCAACGGGGCGACGTC 27941 | | ||||| || || | || |||||||||| | ||| || || |||||||| Sbjct 3547 CCGGCAGAACTATGCGGATGTGGAGAACGCCCAGGGCGATTGGACGAAGGGCGCGACGTC 3488 Query 27942 GGCGTTCGCTGACTACATCGACTCCGCCAGGGACGTCGCGGGCCAGACCTACGAACTGTT 28001 ||||| || | || | || || || | | || |||| ||||||||| | ||||| Sbjct 3487 GGCGTGGGCCAATTATCTGGATTCGGCGAAGAACATCGCCGGCCAGACCAAGACCCTGTT 3428 Query 28002 TAGTAACGCCTTCTCCGGTCTGGAGGATGCCGTCGTTA 28039 | || |||||| | |||| ||||| || |||| Sbjct 3427 CGGCAATGCCTTCAGCTCCATGGAAGATGCGGTTGTTA 3390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120177327143338