Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq8566 84.2 8e-12 >seq8566 Length=6269 Score = 84.2 bits (92), Expect = 8e-12 Identities = 159/225 (71%), Gaps = 12/225 (5%) Strand=Plus/Minus Query 18620 TGTACGGGATCGATCTGAAATGGGCGTTTCCGGGTGACGGATCCGCTGGCGACACGCAGC 18679 ||| ||| |||| |||| |||| |||||| || || ||| | || || |||| Sbjct 2222 TGTTCGGCATCGGCTTGAAGTGGG-GTTTCCC--TGCTGG---CGCCGAGGATACCCAGC 2169 Query 18680 GAACGGAGATCTGGTACAGCCGCACGCCGAATCGCGACGACGCGACCAAGTTCTCCGACT 18739 | || ||| ||||||||| || ||| || | || || |||||| ||| | | || | Sbjct 2168 GCACCGAGCTCTGGTACAACCCGACGAACAACCTCGGCGCCGCGACGAAGCTGGCGGATT 2109 Query 18740 TCGCGTATCCGCAGGCGTCGACG-TCGTAT-CAGGGGCTCGCGGTCGGGCAGGT-GTTTT 18796 | || || |||||||| |||| ||| || ||| ||| || | ||||| | ||| | Sbjct 2108 TGGCATACCCGCAGGC--CGACTATCGCATGCAGTCGCT-GCTGGCGGGCGCGCAGTTCT 2052 Query 18797 ATTTCTGGGCGCGCCTGGTCGACACGTCCGGCAACGTCGGGCCGT 18841 ||||||||||||||||| ||| |||||||| ||||||||| Sbjct 2051 TCTTCTGGGCGCGCCTGGTGGACCGCACCGGCAACATCGGGCCGT 2007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175364285931062