Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq2393 141 2e-28
>seq2393
Length=4323
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || ||||||| ||||| || || ||||||| || || ||
Sbjct 927 GTAGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCTAACTGCTTGCCT 986
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | || || || || || || || || || ||||||||||| | ||
Sbjct 987 GCAAAGATGAGTCGTTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGAATCTTCGACTTC 1046
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|||||||| | |||||| | | || ||||| || || |||||||| |||||||| |||
Sbjct 1047 ACATTTTCGATGGTATCATTCGACTCCACCTCAAGGGTGATAGTCTTGCCAGTAAGAGTT 1106
Query 104543 TTTACAAATATCTGCATT 104560
|| ||||| |||||||||
Sbjct 1107 TTCACAAAGATCTGCATT 1124
Score = 127 bits (140), Expect = 5e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || ||||||| ||||| || || ||||||| || || ||
Sbjct 1959 GTAGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTCCTGCCATCTTCTAACTGCTTGCCT 2018
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | || || || || || || || || || ||||||||||| | ||
Sbjct 2019 GCAAAGATGAGTCGTTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGAATCTTCGACTTC 2078
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|||||||| | |||||| | | || ||||| || ||||||||||| || || || ||
Sbjct 2079 ACATTTTCGATGGTATCATTCGACTCCACCTCAAGAGTAATAGTCTTGCCTGTGAGAGTC 2138
Query 104543 TTTACAAATATCTGCATTTT 104562
|| || || |||||||| ||
Sbjct 2139 TTAACGAAGATCTGCATCTT 2158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150816967915404
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |