Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq18707 192 4e-44 >seq18707 Length=2802 Score = 192 bits (212), Expect = 4e-44 Identities = 400/594 (67%), Gaps = 9/594 (2%) Strand=Plus/Minus Query 25381 TCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGAT 25440 ||| ||| |||||||| | |||||| ||||||||||| |||| || || || ||||| | Sbjct 2603 TCAATGTCGGAAAGGGGCGGGGCTCTCTCTCGAGCTGCTTCTTGAGGGGGTCCACGTGGT 2544 Query 25441 CCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAA 25500 ||| ||||| ||||| || || | |||| || || || |||| | |||| | Sbjct 2543 TGGTGTATACGTGCGCGTCCCCAAGCGAATGGATGAAATCGCCTGGTTTCAACCCGCACA 2484 Query 25501 CGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACC 25560 ||| ||| | | ||| | || |||| |||||||| ||||| || || | || Sbjct 2483 CGTCAGCGAGAAGCACCGTCAACAGGGAGTAAGAAGCGATGTTGAAGGGGACGCCCAGCC 2424 Query 25561 CCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAAC 25620 ||||||| | | |||| ||||| | ||||| |||||||| ||| | ||||| ||| Sbjct 2423 CCATGTCGCAC-GACCGTTGGTACATTTGACAGGAGAGCTCCCCGTTGGCGACGTAGAAC 2365 Query 25621 TGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCG 25680 || || | || |||||| || || || || || | |||||||| || Sbjct 2364 TGGCAGAGCACGTGGCACGGGGGCAGCGCCATCTCCTTCAGCGCCGCGGGGTTCCACGCC 2305 Query 25681 CACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAA----GATCCGCGGTGTTTTG 25736 | | |||||| | ||| || || |||||| | |||| |||| | | | Sbjct 2304 GAGAGGATGATCCGCCTATCGTCGGGGTTGGTCTTGATGGTGTGGATCACCTGCGC---- 2249 Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796 |||||| || || ||| ||| | |||||| || || |||| ||||||| || ||||| Sbjct 2248 CAGCTGGTCGACGCCCTGCCCGGTGTAGTCGGCGTTCCGGTCCTTGTACTCCGCCCCGAA 2189 Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856 | || ||||||||| ||||| | || || ||||| || ||||||||||| | || Sbjct 2188 GTGCCGCCACTGGAAGCCGTAGATGGGCCCCAGGTCGTTCTCCTCCCTGTGCTCGAGCCC 2129 Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916 ||| | || | || || | | || || ||||||||||| || |||||||| Sbjct 2128 CCTGCTGTCGAGGAACTCGCGCGTGCCGTTTCCGTCCCAGATCCCGACGCCCTTCTCCTT 2069 Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGAC 25970 || | ||| || ||| | || |||||||||| | ||||||| ||| ||| Sbjct 2068 CAGGACGTTGCCGTCCGTGCAGCCCTTGACGAACCAGAACAGCTCCTCCGCGAC 2015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339974216285649