Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq29849 111 2e-19
seq21875 105 6e-18
>seq29849
Length=3363
Score = 111 bits (122), Expect = 2e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
|||||||||| | ||||| || ||| | || || || ||||||| ||||| | || ||
Sbjct 1276 CAAAATGCAAATTTTTGTGAAGACACTGACCGGCAAGACGATCACTCTCGAAGTCGAGTC 1217
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|||||||| || ||| | || || ||||| ||||| ||||| || || || ||
Sbjct 1216 CAACGACACGATTGAGAACGTGAAGTCGAAGATCCAGGACAAGGAAGGCATCCCGCCTGA 1157
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| || || | || | || || || |||||||| || | | | | | | ||||||
Sbjct 1156 CCAGCAGCGATTGATCTTCGCAGGAAAGCAACTCGAGGACGGTCGCACCCTTGCCGACTA 1097
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
||||||||||| || || || |||| || || ||| |||| ||||| || ||
Sbjct 1096 CAACATTCAAAAGGAGTCGACCCTCCACCTTGTGCTGCGACTCAGAGGTGGTAA 1043
>seq21875
Length=4161
Score = 105 bits (116), Expect = 6e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | || || || || | || || || |||||||| | || | || |||
Sbjct 446 AAGATGCAGATTTTCGTGAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCA 387
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||| |||||| | || || ||||| ||||| |||||||| || |||||
Sbjct 386 AACGACACGATCGAGAATGTGAAGTCTAAGATCCAGGACAAGGAAGGGATCCCGCCCGAC 327
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| || ||||| || | || ||| || || ||||| || | |||| | ||||||
Sbjct 326 CAGCAGAGACTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACGCTGGCCGACTAC 267
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986
||||| || || || || || |||| |||||| |||||||
Sbjct 266 AACATCCAGAAGGAGTCCACCCTCCACCTGGTCTTGAGACT 226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478426580985360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |