Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq34427 109 1e-18 >seq34427 Length=4033 Score = 109 bits (120), Expect = 1e-18 Identities = 180/260 (69%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 || || |||||||||||||| ||| | ||||| || | ||||| ||||| | | | | Sbjct 2905 ATCGTCGAACGCCCGCAGCACATGCTGATGCGCGTCTCCATTGGCATCCACTTCGAGAAC 2964 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561 | || | | ||||| || ||||| || || ||| ||||| || || || Sbjct 2965 ATCGAAAAGGTCGTGGAAACGTACAAGCTGCTCAGCAACGGTGATTTCACCCATGCAACC 3024 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 ||||| ||| ||| || || || | || || || ||||| || ||||| ||| || Sbjct 3025 CCAACGTTGTTCAACGCAGGGACACCCAACCCGCAAATGTCGTCATGCTTCCTTGTAGCC 3084 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||| || |||||||| |||| || || || |||| || || | || || Sbjct 3085 ATGAAGGACGACTCTATCGAGGGGATCTACGAGACGCTGAAGACCTGCGCGATGATCTCG 3144 Query 363682 AAGAATGCAGGCGGAATTGG 363701 |||| ||| ||||| || || Sbjct 3145 AAGACTGCCGGCGGCATCGG 3164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302695433720966