Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq8566 107 5e-19 >seq8566 Length=6269 Score = 107 bits (118), Expect = 5e-19 Identities = 138/184 (75%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 26213 CCGGATACCATGGCCCGACGTTTCCGGACGTGTCCACGAGGCGCGCCCAGAAGTAGAACA 26272 ||||||| | ||||||| ||| |||| |||||| ||||||||||||||| ||||| Sbjct 1998 CCGGATAGAACGGCCCGATGTTGCCGGTGCGGTCCACCAGGCGCGCCCAGAAGAAGAACT 2057 Query 26273 CCT-GCCCGACCGCAAGCCCCTG-ATACGAC-GTGGACGCCTGCGGATACGCGAAATCCG 26329 | ||||| | ||| || ||| || ||| || | |||||||| || || ||||||| Sbjct 2058 GCGCGCCCGCCAGCA-GCGACTGCATGCGATAGTCG--GCCTGCGGGTATGCCAAATCCG 2114 Query 26330 AAAACTTCGTGGCGTCGTCGCGGCTCGGCGTCCGGCTGTACCAGATCTCGGTGCGCTGCG 26389 | |||||| ||| || || || | |||| || ||||||||| |||||||||||| | Sbjct 2115 CCAGCTTCGTCGCGGCGCCGAGGTTGTTCGTCGGGTTGTACCAGAGCTCGGTGCGCTGGG 2174 Query 26390 TGTC 26393 | || Sbjct 2175 TATC 2178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143350476350308