Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq16947 123 7e-24 >seq16947 Length=20940 Score = 123 bits (136), Expect = 7e-24 Identities = 312/460 (68%), Gaps = 22/460 (5%) Strand=Plus/Plus Query 35441 TTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCC 35500 ||||| | ||| | |||||||| || ||||| | | ||| |||||||||| ||| Sbjct 17784 TTGCAAGCCAAGATCCTCGACCCCCGCATCGGCAACGAATTCCCGCTGCCGGCCTACGCC 17843 Query 35501 ACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACT---GGAGG-CGCCGATGACGTT 35556 || || | || ||| | |||||||| ||| || | ||| | ||| || || Sbjct 17844 ACACCAGGCTCCGCCGGCCTCGACCTGCGCGCCATGCTCAAGCAGGACACCG-TGC--TT 17900 Query 35557 GCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCA 35616 | | || ||| | | |||||||| | |||| | ||||| | ||| ||||||| Sbjct 17901 GAA-CCAGGCCAGACCATTCTGATTCCGACCGGCCTGTCGATCTACGTGGGCGACCCGGG 17959 Query 35617 GCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGG 35676 ||| ||| |||||||||||||||| || || ||||| ||||||||||| ||||| Sbjct 17960 CCTGGCGGCGCTGATCCTGCCGCGCTCCGGCCTGGGCCACAAACACGGCATCGTCCTCGG 18019 Query 35677 CAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGG 35734 |||| ||| || || ||||| |||| |||||||| |||| || | | |||| Sbjct 18020 CAACCTGGT--GGGGCTGATCGACTCGGACTACCAGGGCGAGTTGATGGTGTCCTGCTGG 18077 Query 35735 AATCGCGGCCGCGAGGCCTTCACCATCGAGCCG--GGCGACCGGATTGCGCAGCTGGTGA 35792 || || |||| || |||| ||| |||| ||||| || ||||| || || || Sbjct 18078 AACCGTGGCCAGACCGCGTTCAATATC--GCCGTCGGCGAGCGCATTGCCCAACTCGTAC 18135 Query 35793 TCCTGCCGGTCGTGC--GCGTAGGCTTGCGAG-TGGTGGACACTTTCGTCGACAGCGCGC 35849 | | ||||| |||| ||| | ||| |||| |||| || |||| ||| | | Sbjct 18136 TGGTACCGGTGGTGCAGGCGCA--CTT-CGAGCTGGTCGAAGAGTTCGACGAAACACAAC 18192 Query 35850 GCGGCGCGGGTGGATTCGGTCACACCGGCGTGCGCTGACT 35889 ||||||| ||||| ||||| || ||||| | |||||| Sbjct 18193 GCGGCGCAGGTGGCTTCGGGCATTCCGGCAGCCACTGACT 18232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149066199971130