Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq26061 125 9e-24
seq5074 114 2e-20
>seq26061
Length=1673
Score = 125 bits (138), Expect = 9e-24
Identities = 249/364 (68%), Gaps = 10/364 (3%)
Strand=Plus/Minus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| ||||| |||||||| | |||||||||| || | ||||| | ||||| ||
Sbjct 979 CAGGCGAAGTCGCAGTGCATGCCCTCGTCTCGGGAGATGTACTCGTTCGTGAACGTCAGC 920
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAAGAA 32779
|| ||||| || || ||||| || ||||| || || || ||| || || || || |||||
Sbjct 919 CCCGGCATCAGCCCCCGCTTCTTCAGCCAGAAGATCGA-GCAGAACGACCCGGAGAAGAA 861
Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCGCTGTCAT 32835
|| || || || || || || || | || ||||| | ||| ||| |||| |
Sbjct 860 GATGCCCTCCACCGCTGCGAACGCGACGAGCCTCTCCGCG-AACGTGGCGGAGCTGCCG- 803
Query 32836 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 32895
|||||||| ||||| ||||||||||| | || || |||| ||| || || |
Sbjct 802 --ATCCACTTGATGGCCCACTCGGCCTTCTTCGTGACGCACGGCACCGTCGAGATCGCCT 745
Query 32896 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 32955
| || || || |||||| | | || | || || || || | ||||| |||
Sbjct 744 TGAACAGCGTGTCTTTTTCGGCGTTGTTCTTGATGTACGTGTCGATGAGCAGACTGTACG 685
Query 32956 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAA 33015
| || ||||| |||||||| || || || || || ||||||||||| | ||||||| |
Sbjct 684 TCTCGGAATGGATGTTTTCGATCGCGATCTGGAACCCGTAGAAGCACCGGGCCTCGGGGA 625
Query 33016 TCTG 33019
||||
Sbjct 624 TCTG 621
>seq5074
Length=2057
Score = 114 bits (126), Expect = 2e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 62185 ATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 62244
|||||||||| |||||||||| || |||||||| ||| || | |||| ||||| ||
Sbjct 1553 ATTAACTACTGGAAATTCTCCCGATAATACTCTACGAAGATATACATTAGAAGTATAAGG 1494
Query 62245 TTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 62304
||| | | | || |||||||||| || || ||| ||||| || ||||| ||||| |
Sbjct 1493 TTCGAAACATTCGTTATTTCCCAGGATAATAGAAGTAGATGCTGTGGGCATTGGTGCGAT 1434
Query 62305 CAATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT 62342
||||||||||||| |||| || | | | |||||| ||
Sbjct 1433 CAATAAACTATTTTTAAGTCCATGTTTCTTGATTTCAT 1396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633319833274800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |