Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq29849 107 2e-18
seq21875 86.0 5e-12
>seq29849
Length=3363
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || |||||||||||||| ||| | || ||| || || ||||| || ||
Sbjct 1076 GTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCGAGTTGCTTTCCT 1135
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | ||||| ||||| || || |||||||| ||||| ||||| ||
Sbjct 1136 GCGAAGATCAATCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTCGACTTC 1195
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| |||| ||||| || | || | ||| ||||||||||| ||
Sbjct 1196 ACGTTCTCAATCGTGTCGTTGGACTCGACTTCGAGAGTGATCGTCTTGCCGGTCAGTGTC 1255
Query 114366 TTTACAAAAATCTGCAT 114382
|| |||||||| |||||
Sbjct 1256 TTCACAAAAATTTGCAT 1272
>seq21875
Length=4161
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| |||||||| || | || | || || || || || |||||||| ||| |
Sbjct 217 CCACCACGGAGTCTCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 276
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || | || || || || || || ||| |||| || | ||| ||||| || ||
Sbjct 277 AGCGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGTCTCTGCTGGTCGGGCGGG 336
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||| ||||| ||||| || | | || | |||||| | || || ||
Sbjct 337 ATCCCTTCCTTGTCCTGGATCTTAGACTTCACATTCTCGATCGTGTCGTTTGACTCCACC 396
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | ||| || |||||||| || || || |||||||||||
Sbjct 397 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTCACGAAAATCTGCAT 443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419932590147756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |