Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq29849 107 2e-18 seq21875 86.0 5e-12 >seq29849 Length=3363 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || |||||||||||||| ||| | || ||| || || ||||| || || Sbjct 1076 GTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCGAGTTGCTTTCCT 1135 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | ||||| ||||| || || |||||||| ||||| ||||| || Sbjct 1136 GCGAAGATCAATCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTCGACTTC 1195 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| |||| ||||| || | || | ||| ||||||||||| || Sbjct 1196 ACGTTCTCAATCGTGTCGTTGGACTCGACTTCGAGAGTGATCGTCTTGCCGGTCAGTGTC 1255 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||| ||||| Sbjct 1256 TTCACAAAAATTTGCAT 1272 >seq21875 Length=4161 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| |||||||| || | || | || || || || || |||||||| ||| | Sbjct 217 CCACCACGGAGTCTCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 276 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | || || || || || || ||| |||| || | ||| ||||| || || Sbjct 277 AGCGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGTCTCTGCTGGTCGGGCGGG 336 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||||| || | | || | |||||| | || || || Sbjct 337 ATCCCTTCCTTGTCCTGGATCTTAGACTTCACATTCTCGATCGTGTCGTTTGACTCCACC 396 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||| || |||||||| || || || ||||||||||| Sbjct 397 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTCACGAAAATCTGCAT 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419932590147756