Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq18707 168 6e-37 >seq18707 Length=2802 Score = 168 bits (186), Expect = 6e-37 Identities = 329/484 (68%), Gaps = 4/484 (1%) Strand=Plus/Minus Query 20264 GTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTC 20323 || || ||||| || || ||||| || || || |||| |||||||| | ||||| Sbjct 2466 GTCAACAGGGAGTAAGAAGCGATGTTGAAGGGGACGCCCAGCCCCATGTCGCACGACCGT 2407 Query 20324 TGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAG 20383 || |||| |||||||| ||||| |||| || || || || || || | || ||| || Sbjct 2406 TGGTACATTTGACAGGAGAGCTCCCCGTTGGCGACGTAGAACTGGCAGAGCACGTGGCAC 2347 Query 20384 GGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTA 20443 || || ||||||||| | || |||| ||||||||||| | | ||||| | ||| Sbjct 2346 GGGGGCAGCGCCATCTCCTTCAGCGCCGCGGGGTTCCACGCCGAGAGGATGATCCGCCTA 2287 Query 20444 TCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCT 20503 |||| || || | || || | | | | || || ||||| | ||||| || Sbjct 2286 TCGTCGGGGTTGGTCTTGATGGTGTGGATCACCTGCGCCAGCTGGTCGACGCCCTGCCCG 2227 Query 20504 GTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAA 20563 || ||||| || | | |||| |||| ||||||| ||||||| ||||||||| ||||| Sbjct 2226 GTGTAGTCGGCGTTCCGGTCCTTGTACTCCGCCCCGAAGTGCCGCCACTGGAAGCCGTAG 2167 Query 20564 ACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTG 20623 | || |||| || |||| |||||| | || || | | | | |||||||| | Sbjct 2166 ATGGGCCCCAGGTCGTTCTCCTCCCTGTGCTCGAGCCCCCTGCTGTCGAGGAACTCGCGC 2107 Query 20624 GAGCCATTTTTGTCCCATATCTTGACTCC--TGTTCTTGAAAGCTCCCTGGAGTCAGTAC 20681 | ||| ||| |||||| ||| ||| || | | ||| || | || ||| || | Sbjct 2106 GTGCCGTTTCCGTCCCAGATCCCGACGCCCTTCTCCTT--CAGGACGTTGCCGTCCGTGC 2049 Query 20682 TCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGG 20741 ||||| | ||||| | |||||| | | | || || ||||| ||||||||||| || | Sbjct 2048 AGCCCTTGACGAACCAGAACAGCTCCTCCGCGACCCCGCGCCAGAACACCCGCTTCGTCG 1989 Query 20742 TTAG 20745 | || Sbjct 1988 TCAG 1985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441155352172920