Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq26061 129 7e-25 seq37857 105 8e-18 >seq26061 Length=1673 Score = 129 bits (142), Expect = 7e-25 Identities = 195/269 (72%), Gaps = 9/269 (3%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| ||||||||| || |||| ||| ||| || ||||| || ||||||||| Sbjct 958 CCCTCGTCTCGGGAGATGTACTCGTTCGTGAACGTCAGCCCCGGCATCAGCCCCCGCTTC 899 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 |||| |||||| |||| || || || || ||||||||||| |||||||| |||||| Sbjct 898 TTCAGCCAGAAGATCGAGCAGAACGACCCGGAGAAGAAGATGCCCTCCACCGCTGCGAAC 839 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTGC 126244 || | ||| | ||| || || | | ||| || | | |||||| || ||||||| Sbjct 838 GCGACGAGCCTCTCCGCGAACGTG-GCG--GAGCTGCCGATCCACTTGATGGCCCACTCG 782 Query 126245 GCCTTTTTCTCGATACACGGGACGGTCTGGATCG-CTTCAA-AGAGTTCCTTCTTTTCTG 126302 ||||| ||| || ||||| || ||| ||||| ||| || || || || ||||| | Sbjct 781 GCCTTCTTCGTGACGCACGGCACCGTCGAGATCGCCTTGAACAGCGTGTCT--TTTTCGG 724 Query 126303 -ATGGATCTTTGATGTACTTATCTATGAG 126330 | | || ||||||||| | || ||||| Sbjct 723 CGTTGTTC-TTGATGTACGTGTCGATGAG 696 >seq37857 Length=4355 Score = 105 bits (116), Expect = 8e-18 Identities = 257/380 (68%), Gaps = 16/380 (4%) Strand=Plus/Plus Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839 || || ||| ||||| || || || || || | ||| ||| || | || ||||| Sbjct 3204 GACCTGACGGTCAAAACGGCCCGGACGCAGCAAAGCGGGGTCGAGTACGTCTGGACGGTT 3263 Query 10840 CGTCGCCGCGATGACAACGATGCCCGTC--TCGTTATCAAAGCCATCCATCTCAGTCAAG 10897 || || ||||| || | |||||| ||| || || |||||||| ||||||||| || Sbjct 3264 GGTTGCGGCGATCACGATGATGCC-GTCGTTCATT-TCAAAGCCGTCCATCTCAACCAGC 3321 Query 10898 AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTT 10955 | || || | || || || || ||||||| || | ||| || || | || | Sbjct 3322 AACTGGTTAAGCGTCTGCTCACGCTCATCATGACCG--CCGCCCATGCCGGCGCCACGAT 3379 Query 10956 GCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGG---TTGATTTTCACGGG 11012 | ||| |||||||| |||||||||||||| | ||| ||||| || || | || Sbjct 3380 GGCGACCAACGGCGTCGATTTCATCGATGAAGATGATGCACGGAGCGTGCTTCT---TGG 3436 Query 11013 CAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAAT 11072 | ||| || ||||| || || | ||||||| ||||| || |||||||| || || | Sbjct 3437 CCTGTTCGAACATATCGCGAACACGGCTGGCACCTACACCGACGAACATTTCGACGAAGT 3496 Query 11073 TGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 11131 || ||||| || | || ||| || || |||| ||| || || ||||| ||| | Sbjct 3497 CGGAACCGGAA-ATGGTGAAGAAAGGTACTTTGGCTTCGCCGGCAATGGCCTTGGCCAAC 3555 Query 11132 AGGGTCTTCCCCGTCCCAGG 11151 ||||| || || || || || Sbjct 3556 AGGGTTTTACCGGTACCTGG 3575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597059306282040