Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq29849 118 1e-21 seq34640 91.5 1e-13 seq21875 86.0 6e-12 >seq29849 Length=3363 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | ||||| || |||||||||||||| || || | |||||| |||| Sbjct 1061 AGCACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTGCGACCGTCC 1120 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || || | || | ||||||||||| || || || ||||| || || Sbjct 1121 TCGAGTTGCTTTCCTGCGAAGATCAATCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 1180 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | || || || || ||||| | ||| | ||| Sbjct 1181 TGGATCTTCGACTTCACGTTCTCAATCGTGTCGTTGGACTCGACTTCGAGAGTGATCGTC 1240 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||||||| || || || |||||||||||||| Sbjct 1241 TTGCCGGTCAGTGTCTTCACAAAAATTTGCATTTT 1275 >seq34640 Length=3269 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | |||||| || || || |||||||| || || | || | |||| Sbjct 1131 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTCCTGCCGTCC 1190 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| | || | |||||||||||| || || || || || || || Sbjct 1191 TCCAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 1250 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || ||| | || || || | || | ||| Sbjct 1251 TGGATCTTCGACTTCACATTCTCGATGGTGTCATTCGACTCGACCTCGAGCGTGATTGTC 1310 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| |||| || || ||||| || ||||| || Sbjct 1311 TTGCCCGTCAGGGTCTTAACGAAGATCTGCATCTT 1345 >seq21875 Length=4161 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || || | || | |||| || |||||||| ||| Sbjct 247 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTTCTGCCGTCCTCGAGCTGCTTTCCG 306 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || | |||||||||||| || || ||||| || || || || || ||| Sbjct 307 GCGAAGATCAGTCTCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTAGACTTC 366 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || || | ||||| || | || | ||||| ||||||| || Sbjct 367 ACATTCTCGATCGTGTCGTTTGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTC 426 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| ||||| || Sbjct 427 TTCACGAAAATCTGCATCTT 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499398643743720