Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq23245 262 1e-65 >seq23245 Length=20983 Score = 262 bits (290), Expect = 1e-65 Identities = 366/508 (72%), Gaps = 10/508 (2%) Strand=Plus/Minus Query 15026 AACGTGTTCGTTGCGCCCTCGGTGCATGCGATCGGCTGCCTGGCGGCGGTGCAGCCGTGG 15085 ||||||||| | ||||| ||| | || |||| | ||||| ||| ||| ||| Sbjct 7651 AACGTGTTCCTGGCGCCGTCGTCCCTGGCCATCGCCGCGCTGGCCAAGGTCAAGCAATGG 7592 Query 15086 CAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCACGTGGATTACAAC 15145 ||||||| ||||| |||| || | | | ||| | ||| || || |||||| Sbjct 7591 GAAAGCCCGGGCAATCAGGTGACCTTCGCCGAAGACGTGTCCCGCGTGGTTGAGTACAAC 7532 Query 15146 ATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATCAGCTACTACGCG 15205 || ||||||| || || || |||||||||||||||||||||||| | ||||||||||| Sbjct 7531 ATCCTCGACACCTCCACCGAAGGCGACCTGCTCAACCGCTACGGCGTGAGCTACTACGCC 7472 Query 15206 CGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACCGGCGAGTTTATC 15265 ||||||| ||| ||||| ||||||||| | || |||||| | | |||||| |||| ||| Sbjct 7471 CGCACCATCCTCGGCGGCTTCTCGCTGCTGGGTAACCGCTCCATCACCGGCAAGTTCATC 7412 Query 15266 TCGCACGTAGGCCTTGAAGACGCCATCGGTCGCAAGATCGTC--GGCGCGTCGCAGAAGG 15323 |||| ||||| ||||| || ||| | |||||| | ||| ||| || | ||||| | Sbjct 7411 AGCTACGTGGGCCTGGAAGATGCGATCAGCCGCAAGCTGGTCAAGGC-CGGC-CAGAAAG 7354 Query 15324 CCATGGCGCAGAACTTGACCAAGAGCTTCATGGAGCAGGAGGT---GCGCAAGGTTGATG 15380 ||||||| ||||| | |||||| |||||||| |||||||| ||||| | | | Sbjct 7353 CCATGGCCAAGAACCTCACCAAGTCGTTCATGGACCAGGAGGTCAAGCGCA---TCAACG 7297 Query 15381 CGTTCGTTCAGGATCAGGTTGCTGCTGAGATCATCCCTGGTGGTCGTGTCTATCTGCATC 15440 | | || | ||| || | |||| ||| || || || | || || ||||| | Sbjct 7296 ACTGGCTGCAAACCCTGGTGGCCGACGAGACCATTCCAGGCGGCAGCGTGTACCTGCACC 7237 Query 15441 CTGACCTCAACACGGTCGAGCGCTATAAAAACGGTAGCTGGTACATCGTCATCGAGTACG 15500 |||| || |||| |||||| || || ||||| | ||||| |||||||||||| |||| Sbjct 7236 CTGAACTGAACAGTGTCGAGAAGTACAAGAACGGCACCTGGTTCATCGTCATCGACTACG 7177 Query 15501 GCCGCTATTCCCCCAATGAGCACATGAT 15528 ||||||| | || || || |||||||| Sbjct 7176 GCCGCTACGCGCCGAACGAACACATGAT 7149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125403679911342