Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq23244 208 4e-49 >seq23244 Length=7436 Score = 208 bits (230), Expect = 4e-49 Identities = 428/636 (67%), Gaps = 3/636 (0%) Strand=Plus/Minus Query 66113 GCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCT 66172 ||| || || | || ||| | || ||||| ||| || ||||| || ||||| || || Sbjct 7431 GCTGGGCGTCAACGTTGACGACCTGCTGGTTTCGCAACCGGACACCGGTGAGCAAGCGCT 7372 Query 66173 GGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGT 66232 ||| ||| ||| | || || || || | | | ||||| || ||||| || Sbjct 7371 GGAAATCACCGACATGCTGGTGCGCTCCAACGCCATCGACGTGATCGTGGTCGACTCCGT 7312 Query 66233 GGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCT 66292 ||| |||||||| || ||| || ||||||| || || || ||| |||||| ||||| Sbjct 7311 GGCAGCCCTGGTACCCAAGGCTGAAATCGAAGGCGAAATGGGCGACATGCACGTGGGCCT 7252 Query 66293 GCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAA 66352 || |||||| ||||||| |||||| |||| || | ||||| | || | | |||| Sbjct 7251 TCAAGCCCGCTTGATGTCCCAGGCCCTGCGTAAAATCACCGGTAACATCAAGAACGCCAA 7192 Query 66353 CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 66412 | || | | | || ||| | || |||||||||| || | | |||| Sbjct 7191 CTGCCTGGTGATCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTCGGCAGCCC 7132 Query 66413 GAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGT 66472 | || ||||||||||||||||| || ||| |||||||| ||||| ||| |||| | Sbjct 7131 G---GAAACCACCACCGGTGGTAACGCGCTGAAGTTCTACGCTTCGGTCCGTCTGGACAT 7075 Query 66473 CCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAA 66532 ||| | | || | | | ||||||||| || |||| |||||| | | || ||||| || Sbjct 7074 CCGTCGTACCGGCGCGGTGAAGGAAGGTGACGAGGTTGTCGGTAGCGAAACCCGCGTTAA 7015 Query 66533 GGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGG 66592 || || ||||||||| |||| || ||| ||| ||||| ||||| || ||||||| Sbjct 7014 AGTCGTGAAGAACAAGGTGGCCCCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTCTACGG 6955 Query 66593 CGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAA 66652 | |||| || | || | | || | ||||| ||| ||| | || || || | Sbjct 6954 CAAGGGTATCTACCTGAACGGCGAGATGATCGACCTGGGCGTGCTGCACGGTTTCGTCGA 6895 Query 66653 GAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCGGCCAGGGCAAGCCCAAGAC 66712 ||| || || ||||||| ||| | || || ||||||||||||||| |||| | Sbjct 6894 GAAATCCGGTGCCTGGTATGCCTACAACGGCAGCAAGATCGGCCAGGGCAAGGCCAACTC 6835 Query 66713 CGTGCAGTGGCTGAAGGACAACCCGGACGTCGCCGC 66748 | ||| || ||| |||||||| || ||||| Sbjct 6834 GGCCAAGTTCCTTGCGGATAACCCGGATGTTGCCGC 6799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242353930328396