Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_011216.1 Length=37635 Score E Sequences producing significant alignments: (Bits) Value seq8416 91.5 4e-14 >seq8416 Length=35894 Score = 91.5 bits (100), Expect = 4e-14 Identities = 211/315 (67%), Gaps = 10/315 (3%) Strand=Plus/Plus Query 14670 GGAAAACATGTCGTTCGACGAGCGCCTGCAGGCGGCGAAGACCCTCATCGACGAGTGCAT 14729 ||||| ||| | |||||||| ||||| ||||| ||| | | || || |||||| | Sbjct 6270 GGAAAGCATCGCTTTCGACGAACGCCTCCAGGCTGCGCGTGCATTGATTGATGAGTGCCT 6329 Query 14730 CAACGAATGGGCG--CGCGGCAGCGATCCGAAGATCCAGGT---GCTGGTTCAGCAGGCG 14784 ||| ||| | || |||| || |||||| ||| |||||| | | || Sbjct 6330 GCGCGACTGGACCGCCGGGGCA-CGTCCCGAAGT----GGTCACGCTGGTAAATGATGCC 6384 Query 14785 TTCGAGACGGACAAGGAAGGCAAGATCAACGTCGGCCGCGTACTTGCGCTGCGCCGCTTG 14844 || ||| ||| | | ||| | ||| | | |||||| || ||| ||||||| || Sbjct 6385 TTTCGGACTGACCAAAAGGGCGACATCCGCACAGCCCGCGTCCTGGCGTTGCGCCGTATG 6444 Query 14845 GAGATCACGGACGACAAGTGGCAACGCGCCATGCAGGCGATCGGCGAGTCGGTGCAGGTC 14904 || ||||| || || ||||| |||||||||||||| || ||||| | ||||| Sbjct 6445 GAAATCACCGATGAACGCTGGCAGCGCGCCATGCAGGCCATTGGCGACGCCTGCCAGGTG 6504 Query 14905 GTCGGCACGAAGACGTATATGCGCTTCTACGAGCGCGTCGAGGGCAGCGAACAATACACG 14964 ||||| | ||| | || || ||| | || |||| || | | | ||| |||||| Sbjct 6505 ATCGGCTCCAAGTCCTACATCCGCGTGTATCAGCGGGTTGGTGATACCGACCAATACGAA 6564 Query 14965 CCGATCAGCCTCGAC 14979 || |||||||||||| Sbjct 6565 CCCATCAGCCTCGAC 6579 Score = 89.7 bits (98), Expect = 1e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 6824 GCTGTCGACGGCATGAACTGCGCCAAGCCTTCCGCACCTACCGGGCTCTTTGCGTTGGCC 6883 || ||||| ||||| | ||| ||||||||| |||||| || || ||| |||| | | Sbjct 11409 GCGGTCGAGGGCATCACCTGGCCCAAGCCTTGCGCACCGACGGGCGACTTCGCGTCGAAC 11350 Query 6884 CGCCAGCGGCTTTCCTGATGGATCTGTCCGGCGAACGTTGCGACCGGCGCTTCGAGCCCC 6943 ||||||||||||||| |||||||| ||||||| || | ||||| || || || ||| Sbjct 11349 TTCCAGCGGCTTTCCTGGTGGATCTGAGCGGCGAAGGTGGATACCGGTGCATCCAGGCCC 11290 Query 6944 CA 6945 || Sbjct 11289 CA 11288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120254091198682