Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq26061 120 4e-22 >seq26061 Length=1673 Score = 120 bits (132), Expect = 4e-22 Identities = 192/269 (71%), Gaps = 9/269 (3%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||| ||||||||| || |||| ||| ||| || ||||| || ||||||||| Sbjct 958 CCCTCGTCTCGGGAGATGTACTCGTTCGTGAACGTCAGCCCCGGCATCAGCCCCCGCTTC 899 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||| |||||| |||| || || || || ||||||||||| |||||||| |||||| Sbjct 898 TTCAGCCAGAAGATCGAGCAGAACGACCCGGAGAAGAAGATGCCCTCCACCGCTGCGAAC 839 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGT 127717 || | || | ||| || || | | ||| | | | |||||| || ||||||| Sbjct 838 GCGACGAGCCTCTCCGCGAACGTGGCGGA---GCTGCCGATCCACTTGATGGCCCACTCG 782 Query 127718 GCCTTTTTCTCGATACATGGGACGGTCTGGATCG-CTTCAA-AGAGTTCCTTCTTTTCTG 127775 ||||| ||| || || || || ||| ||||| ||| || || || || ||||| | Sbjct 781 GCCTTCTTCGTGACGCACGGCACCGTCGAGATCGCCTTGAACAGCGTGTCT--TTTTCGG 724 Query 127776 -ATGGATCTTTGATGTACTTATCTATGAG 127803 | | || ||||||||| | || ||||| Sbjct 723 CGTTGTTC-TTGATGTACGTGTCGATGAG 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613204948009080