Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq26061 161 2e-34 >seq26061 Length=1673 Score = 161 bits (178), Expect = 2e-34 Identities = 341/500 (68%), Gaps = 9/500 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||| ||||| ||||| |||||||| | || ||| || |||||||| |||| ||||| Sbjct 1253 CTTTTCGAAGAAGTTTGTCTTGCCTTGCAGGGAGATGAGCTCCATGAAGTCGAACGGGTT 1194 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | || ||| |||| | ||||||| | | | || | ||| ||| || || Sbjct 1193 CGCCGTGTTGTAGTACTTCTCGTAGCCGAGAGTCACGAACAGTCGGTCGCACACGAACTC 1134 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| | |||| | || | ||| ||||| | |||| | || || || || |||| Sbjct 1133 GATGTACTTCGCCATCAGGTCGCTGTTCATCCCGATCAGCTTGACCGGCAGTGCGTCCGT 1074 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA-CAATCTGCGAGACACGTTCG-TAC 159886 | |||||||||||| || | || || || | | |||| | | ||||| || | | Sbjct 1073 TACAAACTCCTTCTCGATGGCTACAGCCTCCGCAAGCAAT-TCCACCACACGCTCCCTGC 1015 Query 159887 CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCC 159946 ||| || | | | | || | || ||||| || ||||||||||||| ||| Sbjct 1014 TGAGGCGTGTGTACTC-GAGCTTGTTGTAGAGCAGGCAGGCGAAGTCGCAGTGCATGCCC 956 Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| || |||||| ||||||| | | | || |||||||| | ||| ||| || Sbjct 955 TCGTCTCGGGAGATGTACTCGTTCGTGAACGTCAGCCCCGGCATCAGCCCCCGCTTCTTC 896 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAA-AAGATCCCCTCCACGGCCGCAAACGC 160065 ||||| || || | ||| || ||| | || ||||| |||||||| || || ||||| Sbjct 895 AGCCAGAAGATCGA-GCAGAACGACCCGGAGAAGAAGATGCCCTCCACCGCTGCGAACGC 837 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 ||||||||||| | || | |||| | || | | ||||| | ||||||| || || Sbjct 836 GACGAGCCTCTCCGCGAACGTGGCGGAGCTGCC---GATCCACTTGATGGCCCACTCGGC 780 Query 160126 CTTCTTTGCGATGCACGGCA 160145 |||||| | || |||||||| Sbjct 779 CTTCTTCGTGACGCACGGCA 760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794763456851280