Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2393 98.7 4e-15 seq5074 95.1 5e-14 >seq2393 Length=4323 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || |||||||||||||| || || || | Sbjct 2155 ATGCAGATCTTCGTTAAGACTCTCACAGGCAAGACTATTACTCTTGAGGTGGAGTCGAAT 2096 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| ||| | | || || ||||| || ||||| || || || || || || Sbjct 2095 GATACCATCGAAAATGTGAAGTCGAAGATTCAGGACAAGGAGGGGATCCCGCCGGACCAG 2036 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || || |||| || || | |||||||| || ||| |||| || || || Sbjct 2035 CAACGACTCATCTTTGCAGGCAAGCAGTTAGAAGATGGCAGGACTCTGGCTGACTACAAC 1976 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 1975 ATCCAGAAGGAGTCTACCCTTCAC 1952 >seq5074 Length=2057 Score = 95.1 bits (104), Expect = 5e-14 Identities = 120/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 502346 AAATGAAATGAAAAAATATGGAACTAGAAACAGTTTGCTTACAGCACTAATGCCAACAGC 502405 ||||||||| || ||| ||||| || ||| ||||| | | |||| |||||| ||||| Sbjct 1394 AAATGAAATCAAGAAACATGGACTTAAAAATAGTTTATTGATCGCACCAATGCCCACAGC 1453 Query 502406 ATCTACATCTCAACTAT--TAGGCAATTATGAATCATTTGAACCATTTACTTCTAATATA 502463 |||||| ||| | ||| | || ||| | |||| || ||||| | |||||||||| || Sbjct 1454 ATCTACTTCT--ATTATCCTGGGAAATAACGAATGTTTCGAACCTTATACTTCTAATGTA 1511 Query 502464 TATACTAGAAGAACTTTAGCAGGTGAATTTATAGTTGTTAATA 502506 ||| | | ||| ||| | || |||||| ||| ||||||| Sbjct 1512 TATCTTCGTAGAGTATTATCGGGAGAATTTCCAGTAGTTAATA 1554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974720703574604