Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq37857 95.1 2e-14 seq26061 86.0 8e-12 >seq37857 Length=4355 Score = 95.1 bits (104), Expect = 2e-14 Identities = 221/325 (68%), Gaps = 14/325 (4%) Strand=Plus/Plus Query 15933 CGATTCGTTGCGGCGATGACAACAATACC-TGTTTCGTTATCAAAACCATCCATCTCTGT 15991 || || ||||||||||| || | || || | ||| || ||||| || |||||||| Sbjct 3259 CGGTTGGTTGCGGCGATCACGATGATGCCGTCGTTCATT-TCAAAGCCGTCCATCTCAAC 3317 Query 15992 CAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTG 16049 || | |||||||| || || || || ||||||| | || ||| || || | Sbjct 3318 CAGCAACTGGTTAAGCGTCTGCTCACGCTCATCAT--GACCGCCGCCCATGCCGGCGCCA 3375 Query 16050 CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG---TTGATTTTCG 16106 || || || ||||| || || ||||| ||||||| |||||| || || || | | Sbjct 3376 CGATGGCGACCAACGGCGTCGATTTCATCGATGAAGATGATGCACGGAGCGTGCTTCTTG 3435 Query 16107 CGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACA 16166 || ||| || | ||| || ||||| |||| || ||||| || ||||| || || Sbjct 3436 ---GCCTGTTCGAACATATCGCGAACACGGCTGGCACCTACACCGACGAACATTTCGACG 3492 Query 16167 AAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGC 16225 |||| | ||||| || | || ||| || || || | ||| || |||||||| ||| Sbjct 3493 AAGTCGGAACCGGAA-ATGGTGAAGAAAGGTACTTTGGCTTCGCCGGCAATGGCCTTGGC 3551 Query 16226 GAGAAGAGTCTTACCCGTACCTGGC 16250 | || || ||||| ||||||||| Sbjct 3552 CAACAGGGTTTTACCGGTACCTGGC 3576 >seq26061 Length=1673 Score = 86.0 bits (94), Expect = 8e-12 Identities = 189/282 (67%), Gaps = 5/282 (2%) Strand=Plus/Plus Query 102033 GAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTC 102092 ||||| |||||| ||||| |||| ||| || ||| | || || || | ||| Sbjct 681 GAGACGTACAGTCTGCTCATCGACACGTACATCAAGAACAACGCCGAAAAAGACACGCTG 740 Query 102093 TTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 102152 || | || ||| || || || || | ||||| || || ||||| || |||||| Sbjct 741 TTCAAGGCGATCTCGACGGTGCCGTGCGTCACGAAGAAGGCCGAGTGGGCCATCAAGTGG 800 Query 102153 TTTGATA-CAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 102211 | | | | | | ||||| || ||| | ||| |||| || || || ||||| Sbjct 801 ATCGGCAGCTCCGCCACGTTC----GCGGAGAGGCTCGTCGCGTTCGCAGCGGTGGAGGG 856 Query 102212 TATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCC 102271 ||||||||||| || || |||||| | || | ||||| |||||||| || || ||||| Sbjct 857 CATCTTCTTCTCCGGGTCGTTCTGCTCGATCTTCTGGCTGAAGAAGCGGGGGCTGATGCC 916 Query 102272 AGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || || ||| | |||||| ||||| || |||||||| Sbjct 917 GGGGCTGACGTTCACGAACGAGTACATCTCCCGAGACGAGGG 958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620436583497360