Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq29849 163 6e-35 seq21875 152 1e-31 >seq29849 Length=3363 Score = 163 bits (180), Expect = 6e-35 Identities = 173/226 (77%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||||| || |||||||| || || ||||| |||||||| ||||| |||||||| || Sbjct 1051 TCTGAGTCGCAGCACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGT 1110 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || || ||||| ||||| ||||||||||| | ||| || ||||| || || ||||| Sbjct 1111 GCGACCGTCCTCGAGTTGCTTTCCTGCGAAGATCAATCGCTGCTGGTCAGGCGGGATGCC 1170 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC--CGAACTTTCCACTTCA 195096 ||| ||||| || || || ||| ||||||||||| ||||| | || || ||||| Sbjct 1171 TTCCTTGTCCTGGATCTTCGACTTCACGTTCTCAATCGTGTCGTTGGAC--TCGACTTCG 1228 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | |||||| || |||| || || || || | |||||||| Sbjct 1229 AGAGTGATCGTCTTGCCGGTCAGTGTCTTCACAAAAATTTGCATTT 1274 >seq21875 Length=4161 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||||||| || ||||| || |||||||| || || || ||||| ||||| || ||||| Sbjct 225 GAGTCTCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTTCT 284 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || ||||||||||| || |||||||| |||| || ||||| || || || ||||| Sbjct 285 GCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGTCTCTGCTGGTCGGGCGGGATCCCTTC 344 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || ||| || ||||| || ||||| ||||| |||||||| Sbjct 345 CTTGTCCTGGATCTTAGACTTCACATTCTCGATCGTGTCGTTTGACTCCACCTCAAGGGT 404 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||| || |||| || || ||||| | ||||| Sbjct 405 GATCGTCTTCCCGGTCAGGGTCTTCACGAAAATCTGCAT 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108921335021771