Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_016160.1
Length=36661
Score E
Sequences producing significant alignments: (Bits) Value
seq8567 152 1e-32
seq8566 80.6 6e-11
>seq8567
Length=29384
Score = 152 bits (168), Expect = 1e-32
Identities = 335/493 (68%), Gaps = 12/493 (2%)
Strand=Plus/Minus
Query 12695 GGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACGAACT 12754
|||| ||||||| ||| ||| || ||||||| | ||||||||||| | ||||||||
Sbjct 1793 GGATCAATGCAAAGGCTGTCTGTCGTCCTGCAAGTTGCGATTCGGCGAGAGCAACGAACT 1734
Query 12755 CTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TATGCGTCAGAAA 12810
|| || || || ||||| | ||| || || |||||| ||| ||||| || |
Sbjct 1733 TTCCTTCGGCGGATTCCCCGCCGTGTCCCTCATTGCCAGGAGCTGACCATGCGCAAGCAC 1674
Query 12811 ACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGCGGCGTG 12870
| || | ||||| ||||||||| ||||| || ||||| ||||| ||||| ||
Sbjct 1673 ATAATTGCGGCGATCCAGGCGCATGCGGCAGCGGAGTATCCGAAAGAGTGCTGCGGGCTG 1614
Query 12871 GTG-GCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCC 12929
|| || || | |||| |||| || || ||||| | ||| |||| || |||||
Sbjct 1613 CTGCTGGCTGTAG-GGCGGGCGCAGAAGTACTTCCCATGCCGGAACATCGCCACGGAGCC 1555
Query 12930 GACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACGGT 12989
|| ||| | |||| || || || ||||| || || || |||||| ||| |||
Sbjct 1554 GAACGAAGAGTTTCGACTTGATCCTGAGGACTACGCTGCAGCGGAGGACCTGGGCGAGGT 1495
Query 12990 GATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCG--AGCGAACTGGATAAA 13047
||||| ||| || ||| ||||| |||||||| | | |||| | || || ||
Sbjct 1494 GATCGGCATTGTCCACTCGCACCCGGACGCCACCAGCCGGCCGTCACCGCAC--GACTTG 1437
Query 13048 GCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGATGGGGATTTA 13107
|| || || | ||| || |||||||| ||| || ||||| || ||||||||
Sbjct 1436 GCCATGTGTGAGGTCACGGCCTTGCCCTGGCACATTCTGTCGTGGCCCGAGGGGGATTTG 1377
Query 13108 CGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGCTTGGACA 13166
|| || ||| ||| || | | || ||||||||| |||| |||||||| | |||
Sbjct 1376 CGGACGATCACGCCAACGGGCCGCAC-GCCACTGCTCAAGCGCCCGTTTGTACATGGCGC 1318
Query 13167 CTTCGACTGCTGG 13179
|| ||||| |||
Sbjct 1317 CTGGGACTGTTGG 1305
>seq8566
Length=6269
Score = 80.6 bits (88), Expect = 6e-11
Identities = 284/444 (64%), Gaps = 0/444 (0%)
Strand=Plus/Minus
Query 15789 CGGTACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGTCAGAGGCG 15848
|| || ||| ||||| |||||| || | |||||||| |||||| | |||| |||||
Sbjct 3120 CGCTATGGCGACAATCCGCTGGAGATCAGTGCCATCGGTTGCACCCGCGAGTCGGAGGCT 3061
Query 15849 AACCGAAAGGGGCGCTGGGGTATTCTCACCAATAACAAGGATCGCGTTGTTTCGTTTGAT 15908
| || || |||| | || || || |||||| | | ||| | || |
Sbjct 3060 CAGCGCCGCGGCAAGTGGGCGCTGCTGACAAACTCCAAGGACAGGGCTGTCACATTCAAG 3001
Query 15909 GTCGGGCTGGACGGAAACATTCCGCAGCCTGGCTACATCATCGCCGTGGCAGACGAGCTG 15968
||||| || || || ||| |||| ||||| ||| | ||| | | || |||||||||
Sbjct 3000 GTCGGCCTTGATGGGCGCATCCCGCTCCCTGGATACGTGATCCCAATCGCGGACGAGCTG 2941
Query 15969 CTTTCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCGTTATCAAACTT 16028
|| | || | ||||||| |||||| || || ||||| || |||| ||
Sbjct 2940 CTGGCGGGCCGGCCGGTGGGCGGGCGCATCTCTGCGGTGAACGGCAAAGTCATCACCCTG 2881
Query 16029 GACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACCTTCCCTCCGGAGCG 16088
||||||| | | || || ||||| ||||| || |||||||| || |||| |
Sbjct 2880 GACCGCGATACCCAGGCGAAGCCCGGTGACCGCCTGATCCTCAACCTGCCTGACGGAAAG 2821
Query 16089 TCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAATCAGTCACAGTCACCACGGCATAC 16148
| || || | ||| | || || | ||| ||||| ||||||||||| |||
Sbjct 2820 TGCGAGGGCCGCACCGTGCAACTGGTCAGCGGCCGCCAGGTCACGGTCACCACGGCGTAC 2761
Query 16149 AGTGAGACGCCACAGGCCGAAGCTGTTTGGGTGGTTGAATCTGACGAGCTCTACGCGCAG 16208
| | |||| || ||| || |||| | | || ||||||| || | | |
Sbjct 2760 TCCGTGGCGCCTGAGCGTGAACTGGTGTGGGCGCTCGACGCTGACGACCTGGCCATCCCG 2701
Query 16209 CAGTATCGAGTTGTCAGCGTTTCC 16232
| |||||| || ||||||||||
Sbjct 2700 CTGTATCGGGTGACCAGCGTTTCC 2677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117138749952638
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |