Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq21847 107 5e-19 seq8869 84.2 5e-12 >seq21847 Length=54027 Score = 107 bits (118), Expect = 5e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 37336 TGGACGCCGTCTATTCATATGCCGCGCTGGGCAAGCCGTATCACGCTGGAAATCACCGAT 37395 |||| |||||| || |||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct 1175 TGGAAGCCGTCGATCCATATGCCGCGCTGGGCATGCCGCATCCTGCTGGAGATCACCGAT 1234 Query 37396 GTGCGCGTGGAGCGGCTGAACGATATCAG 37424 || ||||| ||||||||| | |||||||| Sbjct 1235 GTCCGCGTCGAGCGGCTGCAGGATATCAG 1263 >seq8869 Length=13117 Score = 84.2 bits (92), Expect = 5e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2824 GCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTA 2882 |||||| ||||||||||| ||| ||||||||||||||| ||||||||||| |||||||| Sbjct 12761 GCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTATCCAGCTGAGCTA 12703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123609320117676