Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq18707 291 7e-74 >seq18707 Length=2802 Score = 291 bits (322), Expect = 7e-74 Identities = 442/629 (70%), Gaps = 0/629 (0%) Strand=Plus/Minus Query 29759 TCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGAT 29818 ||| ||| |||||||| | |||||| ||||||||||| |||| || || |||||||| | Sbjct 2603 TCAATGTCGGAAAGGGGCGGGGCTCTCTCTCGAGCTGCTTCTTGAGGGGGTCCACGTGGT 2544 Query 29819 CCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGA 29878 ||| ||||| ||||| || || | |||| || || || |||| | |||| | Sbjct 2543 TGGTGTATACGTGCGCGTCCCCAAGCGAATGGATGAAATCGCCTGGTTTCAACCCGCACA 2484 Query 29879 CGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCC 29938 ||| ||| | | ||| | || ||||| |||||||| ||||| || || |||| Sbjct 2483 CGTCAGCGAGAAGCACCGTCAACAGGGAGTAAGAAGCGATGTTGAAGGGGACGCCCAGCC 2424 Query 29939 CCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACT 29998 ||||||| | ||||| ||||| | ||||| |||||||| |||| | ||||| |||| Sbjct 2423 CCATGTCGCACGACCGTTGGTACATTTGACAGGAGAGCTCCCCGTTGGCGACGTAGAACT 2364 Query 29999 GACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGC 30058 | || | ||||||||| || || ||||| || | ||||||||| || Sbjct 2363 GGCAGAGCACGTGGCACGGGGGCAGCGCCATCTCCTTCAGCGCCGCGGGGTTCCACGCCG 2304 Query 30059 ACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCT 30118 | | |||||| ||||| || || |||||| || ||||| || | | | ||||| Sbjct 2303 AGAGGATGATCCGCCTATCGTCGGGGTTGGTCTTGATGGTGTGGATCACCTGCGCCAGCT 2244 Query 30119 GATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCC 30178 | || || ||| ||| | |||||| || || |||| ||||||| || ||||| |||| Sbjct 2243 GGTCGACGCCCTGCCCGGTGTAGTCGGCGTTCCGGTCCTTGTACTCCGCCCCGAAGTGCC 2184 Query 30179 TCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT 30238 ||||||||| ||||| | || |||||||| ||| ||||||||||||| ||||| Sbjct 2183 GCCACTGGAAGCCGTAGATGGGCCCCAGGTCGTTCTCCTCCCTGTGCTCGAGCCCCCTGC 2124 Query 30239 TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCT 30298 |||| | || || | | ||||| ||||||||||| || |||||||| || Sbjct 2123 TGTCGAGGAACTCGCGCGTGCCGTTTCCGTCCCAGATCCCGACGCCCTTCTCCTTCAGGA 2064 Query 30299 CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAA 30358 | ||| || ||| | || |||||||||| | |||||||||| |||| | ||| | Sbjct 2063 CGTTGCCGTCCGTGCAGCCCTTGACGAACCAGAACAGCTCCTCCGCGACCCCGCGCCAGA 2004 Query 30359 AGACCCTCTTGGTCGTGAGGAGGGGAAAC 30387 | |||| ||| ||||| || || || ||| Sbjct 2003 ACACCCGCTTCGTCGTCAGCAGCGGGAAC 1975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408421322195849