Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq24895 199 7e-46 >seq24895 Length=15594 Score = 199 bits (220), Expect = 7e-46 Identities = 295/408 (72%), Gaps = 15/408 (4%) Strand=Plus/Plus Query 22960 TAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCA 23019 ||||| |||||||||||||| || ||||| |||||||| || || || |||||| Sbjct 3629 TAGGACACTTCGCACTCTTCGTCGGATTCGAAGAACAGCATCTGCGCCACGCCTTCGTTG 3688 Query 23020 GCGTAGATCAGTGCCGGGCTTGGT-GTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTT 23077 |||||||| |||| ||| ||| ||||| ||||| |||||||| || | || | |||| Sbjct 3689 GCGTAGATTTTTGCC-GGCAAGGTGGTGGTGTTGGAGAACTCCAGGGTGA-CGTGCCCTT 3746 Query 23078 TCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATT 23137 |||||| || ||||||||||| ||||| |||||||||||||| ||||| || || || Sbjct 3747 CCCATTCCGGCTCCAGCGGCGTCACGTTGACGATGATGCCGCAGCGCGCGTAGGTGCTTT 3806 Query 23138 TGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCA 23197 |||| ||||||||| | || | |||||| || |||| ||| ||| |||| Sbjct 3807 TGCCCAGGCAGATAGTCAGGACATTACGCGGGATACGGAAGAATTCGACGGTGCGCGCCA 3866 Query 23198 GTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACG 23256 | || || ||| ||||| ||||| ||| | | | | ||| ||| ||| ||| Sbjct 3867 GGGCAAAGGAGTTTGGCGGGATGATGCAGACGTCG--CTCTTG--ACG----TCG--ACG 3916 Query 23257 AAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACC 23316 || | | |||| ||| || || |||||||| || || | ||||||||| ||| Sbjct 3917 AAGCTTTTTTCGTCGAAGTTTTTCGGATCGACGGTTGCCGAGTTGATGTTGGTGAACACC 3976 Query 23317 TTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGAAACACCG 23364 ||||| || | |||| || | |||||||||||||||||||| ||| Sbjct 3977 TTGAACTCATCGGCGCAGCGTACGTCGTAGCCGTAGCTGGAAACCCCG 4024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897151389293040