Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02]
39,413 sequences; 107,915,492 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq24895 199 7e-46
>seq24895
Length=15594
Score = 199 bits (220), Expect = 7e-46
Identities = 295/408 (72%), Gaps = 15/408 (4%)
Strand=Plus/Plus
Query 22960 TAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCA 23019
||||| |||||||||||||| || ||||| |||||||| || || || ||||||
Sbjct 3629 TAGGACACTTCGCACTCTTCGTCGGATTCGAAGAACAGCATCTGCGCCACGCCTTCGTTG 3688
Query 23020 GCGTAGATCAGTGCCGGGCTTGGT-GTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTT 23077
|||||||| |||| ||| ||| ||||| ||||| |||||||| || | || | ||||
Sbjct 3689 GCGTAGATTTTTGCC-GGCAAGGTGGTGGTGTTGGAGAACTCCAGGGTGA-CGTGCCCTT 3746
Query 23078 TCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATT 23137
|||||| || ||||||||||| ||||| |||||||||||||| ||||| || || ||
Sbjct 3747 CCCATTCCGGCTCCAGCGGCGTCACGTTGACGATGATGCCGCAGCGCGCGTAGGTGCTTT 3806
Query 23138 TGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCA 23197
|||| ||||||||| | || | |||||| || |||| ||| ||| ||||
Sbjct 3807 TGCCCAGGCAGATAGTCAGGACATTACGCGGGATACGGAAGAATTCGACGGTGCGCGCCA 3866
Query 23198 GTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACG 23256
| || || ||| ||||| ||||| ||| | | | | ||| ||| ||| |||
Sbjct 3867 GGGCAAAGGAGTTTGGCGGGATGATGCAGACGTCG--CTCTTG--ACG----TCG--ACG 3916
Query 23257 AAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACC 23316
|| | | |||| ||| || || |||||||| || || | ||||||||| |||
Sbjct 3917 AAGCTTTTTTCGTCGAAGTTTTTCGGATCGACGGTTGCCGAGTTGATGTTGGTGAACACC 3976
Query 23317 TTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGAAACACCG 23364
||||| || | |||| || | |||||||||||||||||||| |||
Sbjct 3977 TTGAACTCATCGGCGCAGCGTACGTCGTAGCCGTAGCTGGAAACCCCG 4024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 897151389293040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |