Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq8567 89.7 3e-13 >seq8567 Length=29384 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/227 (69%), Gaps = 19/227 (8%) Strand=Plus/Minus Query 80924 GAGATCGCCGAAATGGTCGGCAGTCGCCATGACAGCGTAAAACGCACCATTGAAAGACTC 80983 |||||||||||| |||||| |||||| |||||||| ||||||||||| || ||||| Sbjct 23990 GAGATCGCCGAACTGGTCGAATCTCGCCACGACAGCGTGAAACGCACCATCGAGAGACTG 23931 Query 80984 GCTAAATCCGG--CGTTATTACTTTTCCACCAATGGTGGAAAAGC-CCACAGC--CGGGC 81038 | || ||| |||||| || |||||||||||||||| | | | || || ||| | Sbjct 23930 GTCGAA--CGGAAGGTTATTGGTTCTCCACCAATGGTGGAATACCTCGACGGCCTCGGCC 23873 Query 81039 GTCCGGCTACGTTTTACTTGTTCGAAGCCGAACAGGGTAAACGCGACAGCATCGTTGTCG 81098 | || ||| | ||| || || | || ||||||||| ||||||| | Sbjct 23872 GCCCAGCTGCCGAGTACCTGGTC------------TGCAAGCGCGACAGCTTCGTTGTTG 23825 Query 81099 TGGCACAGCTTTCTCCTGAATTTACCGCACGCCTTGTTGATCGGTGG 81145 | || || || ||| || || ||||| ||| ||||| || ||| Sbjct 23824 TCGCGCAACTCAGTCCAGAGTTCACCGCCGCCCTCGTTGACCGATGG 23778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330273278331180