Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq26061 174 3e-38 seq34427 84.2 4e-11 >seq26061 Length=1673 Score = 174 bits (192), Expect = 3e-38 Identities = 387/575 (67%), Gaps = 17/575 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| ||||||||||| || | |||| |||||| | ||||||| |||| Sbjct 426 GACATCTGGCAGATGTACAAGGCCGCGGAGGCCTCATTCTGGACGGTCGAAGAGGTTGAC 485 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTTTCTC 25590 ||||| ||| || | | |||| | | || ||| |||| | ||| | || || Sbjct 486 CTGGCGGCCGACCTGAAGGACTGGGAGGGCCT---CAACGACGGGGAGCGACACTTCATC 542 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| | || ||||| || || || || || || || |||||| || | Sbjct 543 ACCCACGTCCTCGCGTTCTTCGCCGCTTCCGACGGCATCGTCCTCGAGAACCTCGCTTCG 602 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| | || | ||| | |||||| ||| |||||||| |||||||| || Sbjct 603 CGGTTCATGAACGACATCCAGATCCCCGAGGCCCGGTGCTTCTACGGGTTCCAGATCGCG 662 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 |||||||| | || || ||| ||| || || || || |||||||| | || Sbjct 663 ATCGAAAACATCCATTCCGAGACGTA---CAGTCTGCTCATCGACACGTACATCAAGAAC 719 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 |||||| | ||| |||||| || ||| | | || || ||| || |||| Sbjct 720 AACGCCGAAAAAGACACGCTGTTCAAGGCGATCTCGACGGTGCCGTGCGTCACGAAGAAG 779 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || ||||||||| ||||||||| |||| ||| ||||| | ||| |||| || Sbjct 780 GCCGAGTGGGCCATCAAGTGGATCGGCAGCTC---CGCCACGTTCGCGGAGAGGCTCGTC 836 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCT 25946 || || || || |||||||||||||| ||| ||| ||||| ||| | ||||||||||| Sbjct 837 GCGTTCGCAGCGGTGGAGGGCATCTTCTTCTCCGGGTCGTTCTGC-TCGATCTTCTGGCT 895 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 ||| || |||| ||||| |||||| || | |||||| |||| | | ||||| Sbjct 896 GAAGAAGCGGGGGCTGATGCCGGGGCTGACGTTCACGAACGAGTACATCTCCCGAGACGA 955 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 ||| | ||| | || || |||||||||||||||| Sbjct 956 GGGCATGCACTGCGACTTCGCCTGCCTGCTCTACA 990 >seq34427 Length=4033 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 222308 ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 |||||||| || ||||| ||||||||||| |||||| |||| || || || ||| Sbjct 3167 ATGCCGATGCCGCCGGCAGTCTTCGAGATCATCGCGCAGGTCTTCAGCGTCTCGTAGATC 3108 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427 ||||| |||||||| ||||| | | | || || || |||||||| || | |||| Sbjct 3107 CCCTCGATAGAGTCGTCCTTCATGGCTACAAGGAAGCATGACGACATTTGCGGGTTGGGT 3048 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCG 222487 | | ||||| |||| ||| || | || || || || | || | | ||| | | Sbjct 3047 GTCCCTGCGTTGAACAACGTTGGGGTTGCATGGGTGAAATCACCGTTGCTGAGCAGCTTG 2988 Query 222488 TACGTCTCTACGACTCTGGCGATGTTGTC 222516 ||||| || ||||| | ||||||| || Sbjct 2987 TACGTTTCCACGACCTTTTCGATGTTCTC 2959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928387192998720