Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq8567 264 3e-66 >seq8567 Length=29384 Score = 264 bits (292), Expect = 3e-66 Identities = 568/840 (68%), Gaps = 13/840 (2%) Strand=Plus/Minus Query 22737 ATGTGGGCGTCATC-AGCATTCGAGAAAAAAGGCCGGACGGTTCTTGGTCAATGCGAAGA 22795 ||||||||||| || ||| ||||||||| | || ||||| || || || || ||| | Sbjct 17219 ATGTGGGCGTCGTCGAGC-TTCGAGAAACAGGGTCGGACCGTCCTGGGCCAGGCCGAGCA 17161 Query 22796 AGTGATGATGCGTGCTGGTGGATGGCAAAAGTCGAGAATGGAACAGCAGATGCATGAATG 22855 || | | || || || || ||||| || | | |||||||| ||||||| ||| || Sbjct 17160 GGTAGCGTTTCGCGCGGGCGGTTGGCAGAAAGCTCGGATGGAACAACAGATGCGTGATTG 17101 Query 22856 GTTCGGGAGAATCCCAGCATTCATTATCACGCTGGCCGCTGACTATTGCGCGGAGTGCTC 22915 |||||| | || || ||||| ||||| |||| || ||||| |||||| ||||| Sbjct 17100 GTTCGGCGATGTGCCGGCTTTCATCATCACCTTGGCTGCCGACTACTGCGCGCAGTGCAG 17041 Query 22916 CGACTTGGATTTCTGCGCGCTGGTAGAACATGAGCTTTACCACATTTGCCACGCTACTGA 22975 |||| | || |||||||| ||| | || || ||||| || ||| | ||||| || || Sbjct 17040 CGACCTAGAGTTCTGCGCTCTGATCGAGCACGAGCTGTATCACCTGGCTCACGCGACCGA 16981 Query 22976 TGAATTCGGTGCTCCGAAATTTAAACGGGATACCGGATTGCCGGTGCTGAAAATGCGCGG 23035 ||| |||| || ||| | | || ||| | |||| | | || ||| || Sbjct 16980 CAAATACGGTCAACCAGCATTCACCCAAGA---CGGCTCGCCGAAGATCAAGCTGCAGGG 16924 Query 23036 TCACGATGTTGAGGAATTCGTTGGCGTCGTTCGCCGCTACGGTGCAAGCCGTGACGTGCA 23095 ||||| || || || ||||| || || || |||||||||||||| |||| |||||| || Sbjct 16923 CCACGACGTAGAAGAGTTCGTCGGTGTTGTCCGCCGCTACGGTGCGAGCCCTGACGTTCA 16864 Query 23096 GGAAATGGTTGATGCGGCAAACAATAGGCCGGAAGTGGCTCACGTCGATGTGGCGAGGGC 23155 | |||| ||||| ||||| | | | || |||| | | | | |||||||| Sbjct 16863 AGCGTTGGTAGATGCTGCAAAAAGTCCTGCTGAGGTGGGGAAATTGAACATTGCGAGGGC 16804 Query 23156 ATGCGGAACGTGCTTATTAAAATTGGCGTGAAATTTTTGACTGATTATGACGAGTGGTGA 23215 |||||||| || | | || | ||| || | | |||| | | ||||| || | Sbjct 16803 CTGCGGAACCTGTCTGCTCAAGTCGGCCTG-ATTCCATGACAGGTATTGACGGATGACAA 16745 Query 23216 -TTTATGGCGGTACTAAAAGGACACGTTAAGTCATTCATTGTTCAGTCATTAGCCTGCTT 23274 |||||| |||||| | | | || || | ||||| |||||| | | |||||||| Sbjct 16744 CCATATGGCAGTACTACGAAGCGAGGTCAAAGCCTTCATCGTTCAGGCTCTGGCCTGCTT 16685 Query 23275 TGATACCCCATCTCAGGTGGTCGATGCCGTCAATAAAGAATTCGGCATTGCGATTACTCG 23334 ||||| ||||| |||||||| | || ||||| | ||||||||| |||| ||| || || Sbjct 16684 CGATACGCCATCCCAGGTGGTAGCAGCGGTCAAGACAGAATTCGGGATTGAGATCACCCG 16625 Query 23335 GCAGCAGGTTGAATCTCATGACCCGACAAAG---GCAAATGGTAGGGGGTTGGCTCAAAA 23391 ||||| |||| | || |||||||||||| || || || | | ||| | | Sbjct 16624 CCAGCAATGTGAAACGCACGACCCGACAAAGTTTGC--CGGGCAGAAGCTCGGC-AAGAC 16568 Query 23392 GTGGGTGGATATATTCAACTCTACGCGAGAGCGCTTCCAGAATGAAATCTCCGACATCCC 23451 |||||||| | ||| || || | || |||| |||| | || | |||| ||||| Sbjct 16567 CTGGGTGGACCTGTTCCACGCTGCTCGCAAGCGATTCCGTGAAGAGACAACCGATATCCC 16508 Query 23452 CATAGCCAATAAAGCCTATCGTCTGCGCGTGCTGCAAAGAATGTCTACGTCGGCCGAGAA 23511 ||| |||||| || || || || |||| || | || | | ||||||||| Sbjct 16507 CATTGCCAATCGTGCGTACCGACTTCGCGGCCTTGGGCGGCTGGCCGAGAAGGCCGAGAA 16448 Query 23512 TATGAAAAACATGGGGATGACAGCTCAGCTACTGGAGCAGGCTGCTAAAGAGGTTGGTGA 23571 ||| ||| ||| | |||| || ||||| ||||| || || |||||| ||||| Sbjct 16447 CATGCGCAACCTGGCGCTGACTGCCCAGCTTTACGAGCAAGCAGCCAAAGAGACGGGTGA 16388 Score = 87.8 bits (96), Expect = 6e-13 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 7981 GTCGGTAACCCACTACGTAAGCTGGTGCTCATTAAGCTGGCTGATAACGCGAATGACAAA 8040 ||||| |||||| | || |||||||| || || |||||||| || ||||| | |||| Sbjct 23256 GTCGGCAACCCATTGCGCAAGCTGGTACTGATCAAGCTGGCCGACAACGCTAGCGACATC 23197 Query 8041 GGTGAATGCTGGCCGTCATACCAGCATGTCGCTGATCAGTGTGAATGCAGCAAAAGCGCA 8100 || || ||||||||||| || ||||| | || || ||||| || |||||| | | Sbjct 23196 GGCGAGTGCTGGCCGTCCTATCAGCACATTGCCGACCAGTGCGAGATCAGCAAGCGTTCT 23137 Query 8101 GTAAAGGCGCACATCACAGCATT 8123 || | | ||||||||||| || Sbjct 23136 GTCATGAATCACATCACAGCCTT 23114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154858687647296